FC876174

Overview
NameFC876174
Unique NameFC876174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9339 contig Ccv1_Contig9339:1..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SULNB (Sulfate adenylyltransferase subunit 1 OS=Sulfurovum sp. (strain NBC37-1) GN=cysN PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 69/212 (32.55%), Postives = 112/212 (52.83%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            + K  +  +  G VD GKST  G ++Y     D ++I  F+ +++     S KY         A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM+TG S AD A+++ID+  G          QTR H+ +   LG++ +I   NKMD     +S+  +D+I     +   ++G   +   ++P S  EGDN+++RS
Sbjct:   20 ENKDMLRFLTCGSVDDGKSTLIGRMLY-----DSKMI--FDDQLSAAEGESRKYGTTGEKLDMALLVDGLQSEREQGITIDVAYRFFATEKRKFIIADTPGHEQYTRNMVTGASTADVAIILIDARKGILT-------QTRRHSFIVNLLGIEHVIVAINKMDLV--DFSEEVFDKISGAYGALADELGI--KNTYYIPVSALEGDNVVDRS 213          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SHEON (Sulfate adenylyltransferase subunit 1 OS=Shewanella oneidensis GN=cysN PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 67/208 (32.21%), Postives = 107/208 (51.44%), Query Frame = 3
Query:   81 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNK--RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            A  + K  +  +  G VD GKST  G L++    I +  +   + + A+M     +   A ++D L+AERE+GITID+A   F + K    + D PGH  + +NM TG S  D AV+++D+  G          QT+ HA +A  LG++  +   NKMD     + +  ++ I  + S ++K  G+    + FVP S   GDN++E S
Sbjct:   15 AQQQHKGLLRFLTCGSVDDGKSTLIGRLLHDSAQIYEDQLASLKNDSAKMGTTGEAIDLALLVDGLQAEREQGITIDVAYRYFSSDKRKFIIADTPGHEQYTRNMATGASTCDLAVILVDARYG-------VQTQTKRHAFIASLLGIRHFVVAINKMDLL--GFDEQVFNRIRNDFSEFVK--GFGELDIHFVPLSALNGDNVVEPS 211          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ENTS8 (Sulfate adenylyltransferase subunit 1 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=cysN PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 69/215 (32.09%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L++D+  G  +       QTR H+ ++  LG+K ++   NKMD     +S+  ++ I ++  ++  ++  N + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLMDARKGVLD-------QTRRHSFISTLLGIKHLVVAVNKMDLV--DFSEETFERIRQDYLTFAGQLPGNLD-IRFVPLSALEGDNVAVQSQNM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECO8A (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O8 (strain IAI1) GN=cysN PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 69/215 (32.09%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++ +++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAEQLPGNLD-IRFVPLSALEGDNVASQSESM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECO55 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain 55989 / EAEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 69/215 (32.09%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++ +++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAEQLPGNLD-IRFVPLSALEGDNVASQSESM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_CHRVO (Sulfate adenylyltransferase subunit 1 OS=Chromobacterium violaceum GN=cysN PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24
Identity = 71/212 (33.49%), Postives = 112/212 (52.83%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            + K  +  +  G VD GKST  G L++     D ++I  FE ++A + + S KY         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S ++ A+++ID+  G          QTR H+ +   LG++ +I   NKMD     YS+  Y+ I  E  ++ + +  +   + FVP S   GDN++ R+
Sbjct:   20 ENKDMLRFITCGSVDDGKSTLIGRLLH-----DSKLI--FEDQLAAIERDSKKYNTTDQDIDLALLVDGLQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRNMATGASTSNLAIILIDARRG-------VQTQTRRHSYIVSLLGIRHVIVAVNKMDLV--DYSEDVYNRIRDEYLTFAEHL--DIPDIHFVPISALRGDNVVSRT 213          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_TOLAT (Sulfate adenylyltransferase subunit 1 OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24
Identity = 66/205 (32.20%), Postives = 105/205 (51.22%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK--YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERS 698
            + K+ +  +  G VD GKST  G L++    + +  ++    +  ++     K  +A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G  E       QTR H+ +A  LG++Q I   NKMD     + +  +D I KE   +    G     +  VP S  +G+N++  S
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLHDSRQVYEDQLKTLHSDSQKIGTTGEKLDFALLVDGLQAEREQGITIDVAYRYFSTPKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARRGVLE-------QTRRHSFIASLLGIRQFIVAVNKMDLV--NFDEKVFDSIKKEYLEFAS--GLPKTDIRVVPISALDGENLVVNS 215          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALAR (Sulfate adenylyltransferase subunit 1 OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAERLPGDLD-IRFVPLSALEGDNVAAQSANM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALG2 (Sulfate adenylyltransferase subunit 1 OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.845e-24
Identity = 67/215 (31.16%), Postives = 115/215 (53.49%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++         ++ +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LGVK ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGVKHLVVAINKMDLV--DYCEETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_METI4 (Elongation factor Tu OS=Methylacidiphilum infernorum (isolate V4) GN=tuf PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 73/207 (35.27%), Postives = 109/207 (52.66%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAW-VLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGDNMIERS 698
            ++K HIN+  IGHVD GK+T T  + Y L           +K +A+      K A+  +DK   E+ERGITI+ A  ++E+ K +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D       K   + +  EV   L + G+  +K+P +  S     EGD   E++
Sbjct:    8 RKKPHINVGTIGHVDHGKTTLTSAITYVLA----------KKGLAQ------KMAYDQIDKAPEEKERGITINTAHVEYESDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLELVELEVRELLNQYGFPGDKIPIIKGSALKALEGDPEYEKN 188          
The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_SULNB5.186e-2432.55Sulfate adenylyltransferase subunit 1 OS=Sulfurovu... [more]
CYSN_SHEON5.186e-2432.21Sulfate adenylyltransferase subunit 1 OS=Shewanell... [more]
CYSN_ENTS85.186e-2432.09Sulfate adenylyltransferase subunit 1 OS=Enterobac... [more]
CYSN_ECO8A5.186e-2432.09Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO555.186e-2432.09Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_CHRVO5.186e-2433.49Sulfate adenylyltransferase subunit 1 OS=Chromobac... [more]
CYSN_TOLAT6.773e-2432.20Sulfate adenylyltransferase subunit 1 OS=Tolumonas... [more]
CYSN_SALAR6.773e-2432.09Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALG28.845e-2431.16Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
EFTU_METI41.155e-2335.27Elongation factor Tu OS=Methylacidiphilum infernor... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32001B11EF DevOvary1 Citrus clementina cDNA clone C32001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGTTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCACCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTT
back to top