FC876174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_CORU7 (Elongation factor Tu OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=tuf PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 74/192 (38.54%), Postives = 102/192 (53.12%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS 665 + K H+NI IGHVD GK+TTT + L E NK +F Y +DK E+ERGITI+I+ ++ET K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + Y+ E+ P VP S Sbjct: 8 RTKPHVNIGTIGHVDHGKTTTTAAITKVL-----------HDTYPEQNK-AFAYD-AIDKAPEEKERGITINISHVEYETEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEELLELVEMEVRELLAEQDYD-EEAPVVPIS 175
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SHISS (Sulfate adenylyltransferase subunit 1 OS=Shigella sonnei (strain Ss046) GN=cysN PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 + K+ + + G VD GKST G L++ D R I +E +++ ++ S ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S + A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD YS+ + I ++ ++ ++ N + + FVP S EGDN+ +S ++ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SHIFL (Sulfate adenylyltransferase subunit 1 OS=Shigella flexneri GN=cysN PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 + K+ + + G VD GKST G L++ D R I +E +++ ++ S ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S + A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD YS+ + I ++ ++ ++ N + + FVP S EGDN+ +S ++ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SHIF8 (Sulfate adenylyltransferase subunit 1 OS=Shigella flexneri serotype 5b (strain 8401) GN=cysN PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 + K+ + + G VD GKST G L++ D R I +E +++ ++ S ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S + A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD YS+ + I ++ ++ ++ N + + FVP S EGDN+ +S ++ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SHIBS (Sulfate adenylyltransferase subunit 1 OS=Shigella boydii serotype 4 (strain Sb227) GN=cysN PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 + K+ + + G VD GKST G L++ D R I +E +++ ++ S ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S + A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD YS+ + I ++ ++ ++ N + + FVP S EGDN+ +S ++ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTHIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SHIB3 (Sulfate adenylyltransferase subunit 1 OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=cysN PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 + K+ + + G VD GKST G L++ D R I +E +++ ++ S ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S + A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD YS+ + I ++ ++ ++ N + + FVP S EGDN+ +S ++ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALTI (Sulfate adenylyltransferase subunit 1 OS=Salmonella typhi GN=cysN PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 + K+ + + G VD GKST G L++ ++ +E +++ ++ S ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S D A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD Y + + I ++ ++ +++ + + + FVP S EGDN+ +S N+ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALSV (Sulfate adenylyltransferase subunit 1 OS=Salmonella schwarzengrund (strain CVM19633) GN=cysN PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 + K+ + + G VD GKST G L++ ++ +E +++ ++ S ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S D A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD Y + + I ++ ++ +++ + + + FVP S EGDN+ +S N+ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALPK (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi A (strain AKU_12601) GN=cysN PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 + K+ + + G VD GKST G L++ ++ +E +++ ++ S ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S D A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD Y + + I ++ ++ +++ + + + FVP S EGDN+ +S N+ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALPB (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysN PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707 + K+ + + G VD GKST G L++ ++ +E +++ ++ S ++ A ++D L+AERE+GITID+A F T K + D PGH + +NM TG S D A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD Y + + I ++ ++ +++ + + + FVP S EGDN+ +S N+ Sbjct: 23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220 The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bpback to top |