FC876174

Overview
NameFC876174
Unique NameFC876174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALPA (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi A GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++         ++ +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALNS (Sulfate adenylyltransferase subunit 1 OS=Salmonella newport (strain SL254) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++         ++ +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALHS (Sulfate adenylyltransferase subunit 1 OS=Salmonella heidelberg (strain SL476) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++         ++ +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALEP (Sulfate adenylyltransferase subunit 1 OS=Salmonella enteritidis PT4 (strain P125109) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++         ++ +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYCEETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALDC (Sulfate adenylyltransferase subunit 1 OS=Salmonella dublin (strain CT_02021853) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++         ++ +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALA4 (Sulfate adenylyltransferase subunit 1 OS=Salmonella agona (strain SL483) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++         ++ +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECOUT (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain UTI89 / UPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECOSM (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECOLI (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain K12) GN=cysN PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220
[Close]
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECOLC (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3 
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEKTFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220
The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_SALPA1.155e-2330.70Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALNS1.155e-2330.70Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALHS1.155e-2330.70Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALEP1.155e-2330.70Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALDC1.155e-2330.70Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALA41.155e-2330.70Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_ECOUT1.155e-2332.09Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOSM1.155e-2332.09Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOLI1.155e-2332.09Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECOLC1.155e-2332.09Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]

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Properties
Property NameValue
Genbank descriptionC32001B11EF DevOvary1 Citrus clementina cDNA clone C32001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGTTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCACCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTT
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