FC876174

Overview
NameFC876174
Unique NameFC876174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECO45 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_YERE8 (Sulfate adenylyltransferase subunit 1 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=cysN PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 64/208 (30.77%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + KT +  +  G VD GKST  G L++    I +  +     +   +  +  K   A ++D L+AERE+GITID+A   F T +    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ +A  LG++ ++   NKMD     Y ++ +++  ++  S+ +++  + + + FVP S  +GDN+   S  +
Sbjct:   26 QHKTMLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLTTLHTDSKRLGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEQRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFIATLLGIRHLVVAVNKMDLV--DYQESVFEQFKQDYLSFAQQLPTDLD-IKFVPLSALDGDNVASPSEKM 223          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SHIDS (Sulfate adenylyltransferase subunit 1 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cysN PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLM--DYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALPC (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi C (strain RKS4594) GN=cysN PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++         ++ +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--GYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_SALCH (Sulfate adenylyltransferase subunit 1 OS=Salmonella choleraesuis GN=cysN PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 66/215 (30.70%), Postives = 115/215 (53.49%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++         ++ +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP S  EGDN+  +S N+
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLHD-------TLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--GYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECOLU (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++  ++  ++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--GYSEETFTRIREDYLTFAGQLPGNLD-IRFVPLSALEGDNVASQSESM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_ECO27 (Sulfate adenylyltransferase subunit 1 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=cysN PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 72/217 (33.18%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK--VPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     YS+  +  I ++   YL   G  P    + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYSEETFTRIRED---YLTFAGLLPGNLDIRFVPLSALEGDNVASQSESM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_CITK8 (Sulfate adenylyltransferase subunit 1 OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=cysN PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.509e-23
Identity = 69/215 (32.09%), Postives = 116/215 (53.95%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMIERSTNL 707
            + K+ +  +  G VD GKST  G L++     D R I  +E +++ ++  S ++         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     +S+  +  I ++  ++  ++  N + + FVP S  EGDN+  +S ++
Sbjct:   23 QHKSLLRFLTCGSVDDGKSTLIGRLLH-----DTRQI--YEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--GFSEETFARIREDYLTFAGQLPGNRD-IRFVPLSALEGDNVATQSASM 220          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_CORK4 (Elongation factor Tu OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=tuf PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23
Identity = 76/206 (36.89%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGDNMIERS 698
            + K H+NI  IGHVD GK+TTT         I K + E++ +E      ++F +   +DK   E+ERGITI+IA  ++ T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L +  ++ E  P V  S     EGD   E+S
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTTTA-------AITKVLSEKYPEE-----NQAFAFD-AIDKAPEEKERGITINIAHVEYSTPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEDLIELVEMEVRELLAEQDFD-EDAPIVHISALKALEGDEKWEQS 189          
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_ARTAT (Elongation factor Tu OS=Arthrobacter aurescens (strain TC1) GN=tuf PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23
Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 3
Query:   90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSG---FEGD 680
            + K H+NI  IGHVD GK+T T         I K + +++     ++N+ R F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   D +  EV   L   G++ ++ P V  SG    EGD
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTA-------AISKVLYDQYP----DLNEQRDFAS---IDSAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKSDMVD---DEELLDLVEMEVRELLSSQGFDGDEAPVVRVSGLKALEGD 184          
The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_ECO451.155e-2332.09Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_YERE81.509e-2330.77Sulfate adenylyltransferase subunit 1 OS=Yersinia ... [more]
CYSN_SHIDS1.509e-2332.09Sulfate adenylyltransferase subunit 1 OS=Shigella ... [more]
CYSN_SALPC1.509e-2330.70Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_SALCH1.509e-2330.70Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
CYSN_ECOLU1.509e-2332.09Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_ECO271.509e-2333.18Sulfate adenylyltransferase subunit 1 OS=Escherich... [more]
CYSN_CITK81.509e-2332.09Sulfate adenylyltransferase subunit 1 OS=Citrobact... [more]
EFTU_CORK41.971e-2336.89Elongation factor Tu OS=Corynebacterium kroppenste... [more]
EFTU_ARTAT1.971e-2336.32Elongation factor Tu OS=Arthrobacter aurescens (st... [more]

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Properties
Property NameValue
Genbank descriptionC32001B11EF DevOvary1 Citrus clementina cDNA clone C32001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bp
GACTCTTTGCCCTCCCTCTTTTCTTGCTTGCTCTGCGGCTAGGTTTCAAT
TGTCTCTTCGAAGTTTCAGTTAATTTAACAGCCATGGGTAAGGAGAAGAC
TCACATCAACATTGTGGTGATTGGCCATGTCGACTCTGGAAAGTCGACCA
CCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATC
GAGAGGTTCGAGAAGGAAGTTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCACCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTT
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