FC876174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_ANADF (Elongation factor Tu OS=Anaeromyxobacter sp. (strain Fw109-5) GN=tuf1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 69/200 (34.50%), Postives = 95/200 (47.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+N+ IGHVD GK+T T + K A + F +DK ERERGITI A ++ T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D K D + EV L + + ++P V S EGD Sbjct: 8 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KYCATQGRAQFMAYDQIDKAPEERERGITIATAHVEYSTDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYMVVFLNKVDMVD---DKELLDLVELEVRELLSEYEFPGNEIPIVKGSALKALEGD 182
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU2_STRAW (Elongation factor Tu 2 OS=Streptomyces avermitilis GN=tuf2 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 71/204 (34.80%), Postives = 100/204 (49.02%), Query Frame = 3 Query: 78 TAMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSG---FEGD 680 TA + K H+NI +GHVD GK+T T + K +AE +F +D+ E RGITI+IA ++ET + +D PGH D++KNM+TG +Q D A+L++ + G QT EH LLA +GV ++ NK DA + + D + EV L GY + VP V SG EGD Sbjct: 4 TAYVRTKPHLNIGTMGHVDHGKTTLTAAIT---------------KVLAERGSGTFVPFDRIDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRELLTAHGYGGDSVPVVRVSGLKALEGD 181
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU2_MYXXD (Elongation factor Tu 2 OS=Myxococcus xanthus (strain DK 1622) GN=tuf2 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 66/200 (33.00%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+NI IGHVD GK++ T + K +A+ +F ++DK ERERGITI + +++T+ + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + EV LKK + + +P +P S EGD Sbjct: 8 RNKPHVNIGTIGHVDHGKTSLTAAIT---------------KVLAKTGGATFLAYDLIDKAPEERERGITISTSHVEYQTSNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDDIPIIPGSALKALEGD 182
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU1_MYXXD (Elongation factor Tu 1 OS=Myxococcus xanthus (strain DK 1622) GN=tuf1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 66/200 (33.00%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+NI IGHVD GK++ T + K +A+ +F ++DK ERERGITI + +++T+ + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + EV LKK + + +P +P S EGD Sbjct: 8 RNKPHVNIGTIGHVDHGKTSLTAAIT---------------KVLAKTGGATFLAYDLIDKAPEERERGITISTSHVEYQTSNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDDIPIIPGSALKALEGD 182
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_METPB (Sulfate adenylyltransferase subunit 1 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=cysN PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 68/209 (32.54%), Postives = 107/209 (51.20%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMI 689 + K + + G VD GKST G L++ I F+ +V + + S K+ A ++D L+AERE+GITID+A F T + V D PGH + +NM TG S AD AV+++D+ G QTR HALL LG+ ++ NKMD +S+ ++D I+ ++ + ++ +V +P S GDN++ Sbjct: 20 QSKEVLRFITCGSVDDGKSTLIGRLLHDTKQI-------FDDQVTALQRDSRKHGTQGAEVDLALLVDGLQAEREQGITIDVAYRFFSTDRRSFIVADTPGHEQYTRNMATGASTADVAVILVDARHG-------LTRQTRRHALLVSLLGIHRVALAINKMDLV--GWSQDKFDAILSGFQAFAAPLNFS--EVRAIPLSAKNGDNVV 210
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_STIAU (Elongation factor Tu OS=Stigmatella aurantiaca GN=tuf PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22 Identity = 67/200 (33.50%), Postives = 99/200 (49.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+NI IGHVD GK++ T + K +A+ +F +DK ERERGITI A +++T + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + EV LKK + + +P +P S EGD Sbjct: 8 RNKPHVNIGTIGHVDHGKTSLTAAIT---------------KVLAKTGGATFLAYDQIDKAPEERERGITISTAHVEYQTKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDSIPIIPGSALKALEGD 182
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_SPIAU (Elongation factor Tu (Fragment) OS=Spirochaeta aurantia GN=tuf PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22 Identity = 66/195 (33.85%), Postives = 99/195 (50.77%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHL-IYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGF 671 + K HIN+ IGHVD GK+T T L +Y +V+ + +D E+ERGITI+ ++E+ + +D PGH D++KNMITG +Q D A+L++ + +G + QTREH LLA +GV ++ NKMD P+ + + EV L G++ EK PF+ S F Sbjct: 8 RSKPHINVGAIGHVDHGKTTLTAALTMYGAKKHGGKVMNYDD----------------IDNAPEEKERGITINTRHVEYESAARHYAHVDCPGHADYVKNMITGAAQMDGAILLVAADSG-------PEPQTREHILLAKQVGVANLVIFLNKMDLADPEL----VELVEMEVRDLLNLYGFDGEKTPFIRGSAF 175
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_PROA2 (Elongation factor Tu OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tuf PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22 Identity = 67/178 (37.64%), Postives = 94/178 (52.81%), Query Frame = 3 Query: 81 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 614 A +EK H+NI IGHVD GK+T T + L +K +A++ + +DK ERERGITI A ++ET K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + E+ + +S Y Sbjct: 5 AYKREKPHVNIGTIGHVDHGKTTLTAAITTVLA----------KKGMAQLREFGD-----IDKAPEERERGITISTAHVEYETDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPELIELVELELRELLSEY 160
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_DICDI (Elongation factor Tu, mitochondrial OS=Dictyostelium discoideum GN=tufm PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22 Identity = 65/190 (34.21%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 656 + K H+N+ IGHVD GK+T T + K +++ +FK +DK E+ RGITI + ++E+ + ID PGH+ +IKNMITG +Q D A+L++ + G E QTREH +L+ +G+ ++ NKMD P EIV+ EV L + G+N ++ PFV Sbjct: 34 RTKPHVNVGTIGHVDHGKTTLTAAIT---------------KTLSDRGLANFKSYAQIDKSPEEKARGITITASHIEYESATRHYAHIDCPGHQHYIKNMITGAAQMDGAILVVSAPDGPQE-------QTREHIILSREVGIPALVVFLNKMDNADPDLV-----EIVEMEVRELLSQYGFNGDETPFV 196
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_CHICK (Elongation factor Tu, mitochondrial (Fragment) OS=Gallus gallus GN=TUFM PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22 Identity = 66/193 (34.20%), Postives = 99/193 (51.30%), Query Frame = 3 Query: 81 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 656 A +++ H+N+ IGHVD GK+T T + L +R+E +DK ER RGITI+ A ++ T + + D PGH D++KNMITGT+ D +L++ +T G QTREH LLA +GV+ ++ NK DA S A +V+ E+ L ++GY+ E+ P V Sbjct: 40 AFVRDRPHVNVGTIGHVDHGKTTLTAAITKVLSESGGARFQRYED---------------IDKAPEERARGITINAAHVEYSTARRHYAHTDCPGHADYVKNMITGTAPLDGCILVVAATDGQMP-------QTREHLLLARQVGVRHVVVYVNKADAV----SDAELLPLVELELRELLAEMGYDAERTPVV 206 The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bpback to top |