FC876174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 67/191 (35.08%), Postives = 97/191 (50.79%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPTS 665 K H+NI IGHVD GK+T T + L K ++++ +D E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK D + A E+V+ EV L K + +++PFV S Sbjct: 10 KPHVNIGTIGHVDHGKTTLTAAITTALASQGKGKARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPNMVVFLNKED----QIDDADLLELVELEVRELLSKYDFPGDQIPFVSGS 174
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPB (Elongation factor Tu OS=Chlorobium phaeobacteroides (strain BS1) GN=tuf PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 69/209 (33.01%), Postives = 100/209 (47.85%), Query Frame = 3 Query: 81 AMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGDNMIERS 698 A ++K H+NI IGHVD GK+T T + L + F +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P + S EGD E++ Sbjct: 5 AYKRDKPHVNIGTIGHVDHGKTTLTAAITSVLAKAGNAEMREFGD---------------IDKAPEERERGITISTAHVEYQTEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----LELVELELRELLTEYDFPGDDIPIIKGSALKALEGDAEAEKA 187
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_BRELN (Elongation factor Tu OS=Brevibacterium linens GN=tuf PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+NI IGHVD GK+T T I K + +++ ++N+ R+F +D E+ERGITI+++ +++T K + +DAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ + P +P S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLADQYP----DLNEARAFDQ---VDNAPEEKERGITINVSHVEYQTEKRHYAHVDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYIVVALNKSDMVD---DEELLELVEFEVRDLLSSQDFDGDNAPVIPVSALKALEGD 184
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_BORRA (Elongation factor Tu OS=Borrelia recurrentis (strain A1) GN=tuf PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 64/194 (32.99%), Postives = 101/194 (52.06%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGF 671 + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G+ P P V S F Sbjct: 8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKVNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGF-PSDTPIVKGSAF 175
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_BORDL (Elongation factor Tu OS=Borrelia duttonii (strain Ly) GN=tuf PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 64/194 (32.99%), Postives = 101/194 (52.06%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGF 671 + K H+N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G+ P P V S F Sbjct: 8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKVNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGF-PSDTPIVKGSAF 175
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_ANADE (Elongation factor Tu OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tuf1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 68/200 (34.00%), Postives = 97/200 (48.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+N+ IGHVD GK+T T + K +A+ F +DK ERERGITI A +++T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D K D + EV L + + ++P V S EGD Sbjct: 8 RSKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAQKGGAQFLAYDQIDKAPEERERGITIATAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLDLVELEVRELLSEYDFPGNEIPIVKGSALKALEGD 182
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: CYSN_METC4 (Sulfate adenylyltransferase subunit 1 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=cysN PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 67/209 (32.06%), Postives = 107/209 (51.20%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFK---------YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFEGDNMI 689 + K + + G VD GKST G L++ I F+ +V + + S K +A ++D L+AERE+GITID+A F T + V D PGH + +NM TG S AD AV+++D+ G Q+R HALL LG++++ NKMD +S+ +++ IV ++ + + +V +P S GDN++ Sbjct: 20 QNKEVLRFITCGSVDDGKSTLIGRLLHDTKQI-------FDDQVTALQRDSRKHGTQGGEVDFALLVDGLQAEREQGITIDVAYRFFSTDRRSFIVADTPGHEQYTRNMATGASTADLAVILVDARHG-------LTRQSRRHALLVSLLGIRRVALAINKMDLV--GWSQDKFEAIVSGFQAFAAPLNFT--EVRAIPLSAKNGDNVV 210
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJA (Elongation factor Tu OS=Synechococcus sp. (strain JA-3-3Ab) GN=tuf PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 59/195 (30.26%), Postives = 98/195 (50.26%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTSGFE 674 + K H+N+ IGHVD GK+T T + L + + +R+++ +D ER RGITI+ A +++T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + E+ L K + +++P + S + Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITMTLAALGQATAKRYDE---------------IDAAPEERARGITINTAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPSLVVFLNKVDMVD---DEELLELVELEIRELLSKYDFPGDEIPIIRGSALK 177
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_LACH4 (Elongation factor Tu OS=Lactobacillus helveticus (strain DPC 4571) GN=tuf PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 73/200 (36.50%), Postives = 99/200 (49.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGD 680 + K H+NI IGHVD GK+T T + L EK +A+ S +D E+ERGITI+ A ++ET K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P V S EGD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLA----------EKGLAKAEDYS-----QIDAAPEEKERGITINTAHVEYETEKRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKCDLVD---DPELIDLVEMEVRDLLTEYDYPGDDIPVVRGSALKALEGD 183
BLAST of FC876174 vs. ExPASy Swiss-Prot
Match: EFTU_LACBA (Elongation factor Tu OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=tuf PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 74/205 (36.10%), Postives = 102/205 (49.76%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEVAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPTS---GFEGDNMIER 695 + K H+NI IGH+D GK+T T + L +K +A+ YA + D ERERGITI+ A ++ET K + IDAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P + S EGD E+ Sbjct: 9 RTKPHVNIGTIGHIDHGKTTLTAAITKVLA----------DKGLAKAED----YADI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYIVVFLNKTDLVD---DDELVDLVEMEVRELLSEYDYPGDDIPVIRGSALKALEGDEEQEK 188 The following BLAST results are available for this feature:
BLAST of FC876174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876174 ID=FC876174; Name=FC876174; organism=Citrus clementina; type=EST; length=707bpback to top |