FC876181
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNG (Small COPII coat GTPase SAR1 OS=Aspergillus niger GN=sar1 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.213e-45 Identity = 97/181 (53.59%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 M+L++WFY +LASLGL K AK+LFLGLDNAGKTTLLHMLK++R+ QPT +PTSEEL+IG +F FDLGGHQ ARR+W E F ESK VPFL+LGNKID P A SE+++R+ LGL TTGKG+V L +RP+EVFMCS+V + GY Sbjct: 1 MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQ-TTGKGKVPLE--GIRPIEVFMCSVVMRQGY 178
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.196e-45 Identity = 99/181 (54.70%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 MFL DWF+ VL+ LGL+ K AKILFLGLDNAGKTTLL +LKD RL + PT +PTSEEL++G I+FKAFDLGGH+ ARR+W +RF ESKK NVPFL+LGNK+DI SEE+ R LGL TTGKG+ L VRP+EVFMCS+V++ GY Sbjct: 1 MFLFDWFWNVLSFLGLYNKNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIG-NTSEEKFRASLGLTQ-TTGKGKTTLN--GVRPIEVFMCSVVKRYGY 177
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.481e-45 Identity = 97/181 (53.59%), Postives = 117/181 (64.64%), Query Frame = 3 Query: 180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 MF+++WFY LA LGL K AK+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ER +ESK VPFL+LGNKID P A SE+EL+ LGL TTGKG V+ +RP+EVFMCS+V + GY Sbjct: 1 MFIINWFYDALAMLGLVNKHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQ-TTGKG-VSKPVPGIRPIEVFMCSVVLRQGY 179
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 7.158e-45 Identity = 99/181 (54.70%), Postives = 114/181 (62.98%), Query Frame = 3 Query: 180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 M++ DWF VLASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ER AESK VPFL+LGNKID A E EL+ LGL N TTGK L E RP+EVFM S+V +MGY Sbjct: 1 MWIFDWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELSQVPFLILGNKIDKSTAIGEMELKSALGLYN-TTGKDVTKLPE-GQRPIEVFMVSVVMRMGY 179
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.158e-45 Identity = 96/181 (53.04%), Postives = 115/181 (63.54%), Query Frame = 3 Query: 180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 M+L WFY +L++LGL K K+LFLGLDNAGKTTLLHMLK++R+ QPT +PTSEELS+G +KF FDLGGHQ ARR+W ER E+K VPF+VLGNKID P A SE+ELR LGL TTGKG V L +RP+EVFMCS+V + GY Sbjct: 1 MWLWSWFYDILSNLGLLNKHGKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEELAKVPFVVLGNKIDHPEAVSEDELRQRLGLWQ-TTGKGRVPLE--GIRPIEVFMCSVVMRQGY 178
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.083e-44 Identity = 89/180 (49.44%), Postives = 116/180 (64.44%), Query Frame = 3 Query: 183 FLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 FL DWF GVL LGL K+ K++FLGLDNAGKTTLLHMLKD+R+ QH PT +PTSE++S+G I F +DLGGH ARRVW ER ES+ +VP L+LGNKID P A SE++L++ L + + TGKG+V+ E+ RP+EVFMCS++++ GY Sbjct: 3 FLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHMCTGKGDVSRNEMASRPMEVFMCSVLQRQGY 182
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.083e-44 Identity = 95/184 (51.63%), Postives = 113/184 (61.41%), Query Frame = 3 Query: 183 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 F+ +W Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L ELN RP+EVFMCS++++ GY Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGY 186
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.083e-44 Identity = 95/184 (51.63%), Postives = 113/184 (61.41%), Query Frame = 3 Query: 183 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 F+ +W Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L ELN RP+EVFMCS++++ GY Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGY 186
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.552e-44 Identity = 95/184 (51.63%), Postives = 113/184 (61.41%), Query Frame = 3 Query: 183 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 F+ +W Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L ELN RP+EVFMCS++++ GY Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGY 186
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.552e-44 Identity = 95/184 (51.63%), Postives = 113/184 (61.41%), Query Frame = 3 Query: 183 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 F+ +W Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L ELN RP+EVFMCS++++ GY Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGY 186 The following BLAST results are available for this feature:
BLAST of FC876181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876181 ID=FC876181; Name=FC876181; organism=Citrus clementina; type=EST; length=722bpback to top |