FC876181
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.928e-43 Identity = 94/184 (51.09%), Postives = 112/184 (60.87%), Query Frame = 3 Query: 183 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 F+ +W Y VL LGL++K K++FLGLDNAGKTTLL MLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L ELN RP+EVFMCS++++ GY Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGY 186
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42 Identity = 95/179 (53.07%), Postives = 110/179 (61.45%), Query Frame = 3 Query: 186 LLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 L WF +L+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ NVPF VLGNKID P A SE ELR LGL N TTG ++ RP+E+FMCS+V K GY Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMN-TTGYTKIE----GQRPIELFMCSVVMKSGY 179
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42 Identity = 94/179 (52.51%), Postives = 110/179 (61.45%), Query Frame = 3 Query: 186 LLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 + WF VLASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ +VPF++LGNKID P A SE ELR LGL N TTG + RP+EVFMCS+V + GY Sbjct: 6 IFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLN-TTGSQRIE----GQRPVEVFMCSVVMRNGY 179
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42 Identity = 93/179 (51.96%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 186 LLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 L WF +L+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ VPF++LGNKID P A SE ELR LGL N TTG + RP+E+FMCS+V K GY Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLN-TTGDARIE----GQRPVELFMCSVVMKSGY 179
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 9.674e-42 Identity = 93/174 (53.45%), Postives = 111/174 (63.79%), Query Frame = 3 Query: 201 YGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 + VL+SLGL K AK+LFLGLDNAGKTTLLHMLK++R+ QPT +PTSEELSIG +KF FDLGGH ARR+W ER ESK N PF++LGNKID P A SE++LR LGL TTGKG+V L +RP+EVFMCS+V + GY Sbjct: 4 WDVLSSLGLMNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILGNKIDHPEAVSEDQLRATLGLYQ-TTGKGKVPLE--GIRPIEVFMCSVVMRQGY 174
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.801e-41 Identity = 92/176 (52.27%), Postives = 108/176 (61.36%), Query Frame = 3 Query: 195 WFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 WF VLASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W +RF E++ +VPF++LGNKID A SE ELR LGL N TTG + RP+EVFMCS+V + GY Sbjct: 8 WFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLN-TTGSQRIE----GQRPVEVFMCSVVMRNGY 178
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.145e-34 Identity = 76/177 (42.94%), Postives = 102/177 (57.63%), Query Frame = 3 Query: 192 DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMGY 722 DWF L+ LGL++K+A I+F+GLDNAGK+TLL MLK+ PTQ PTS+EL +G I+FK FDLGGH++AR++W RF ES++ P L+L NK+DI A S E + G+ + TGKG NL + RPLEVF CS++ + GY Sbjct: 5 DWFKSALSFLGLYKKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLRS-DQRPLEVFPCSVINRFGY 180
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20 Identity = 63/181 (34.81%), Postives = 84/181 (46.41%), Query Frame = 3 Query: 180 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVW-XXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLXNFTTGKGEVNLAELNVRPLEVFMCSIVRKMG 719 MFL+DWFY + LG ++KEAKI+ +GL NAGKTTLLH+L L H PT P +E + G + FKA+DLGG Q R +W ESK P L+LG+K D + E L L + F E+ L N P ++ M S + + G Sbjct: 1 MFLVDWFYNMFLWLGFFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSHIPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRRF-----ELGLNNSNNVPFDLIMTSSITRYG 176
BLAST of FC876181 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = 3 Query: 225 LWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDI 578 L+ K + ILFLG+DNAGKTTL++ LK + + PT +P++ + IG +K + DLGGH AR W ERF E ++ P +VL NKID+ Sbjct: 31 LFGKPSSILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVRE--AYETVLSLEKRAPVVVLMNKIDL 146 The following BLAST results are available for this feature:
BLAST of FC876181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876181 ID=FC876181; Name=FC876181; organism=Citrus clementina; type=EST; length=722bpback to top |