FC876182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_MOUSE (Cytosolic Fe-S cluster assembly factor NUBP1 OS=Mus musculus GN=Nubp1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.224e-15 Identity = 35/63 (55.56%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 486 ENANEHCPGPQSESAGESDDCQGCPNQEACAT-APKGPDPDLVAIAERMATVKHKILVLSGKG 671 E A CPG S AG CQGCPNQ CA+ A PDP + I E+M TV+HK+LVLSGKG Sbjct: 2 EEAPHGCPGADSAQAGRGASCQGCPNQRLCASGAGAAPDPAVEEIREKMKTVRHKLLVLSGKG 64 HSP 2 Score: 30.4166 bits (67), Expect = 3.224e-15 Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALA 720 +GGVGKSTFSA L++ LA Sbjct: 63 KGGVGKSTFSAHLAHGLA 80
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_CAEBR (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Caenorhabditis briggsae GN=CBG03788 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 3.227e-15 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 477 EIPENANEHCPGPQSESAGESDDCQGCPNQEACATAP-KGPDPDLVAIAERMATVKHKILVLSGKG 671 ++PE+AN CPG S AG++ C GCPNQ ACAT PD D+ I +R + +KHKIL+LSGKG Sbjct: 3 DVPEDANAGCPGTGSAGAGKASGCAGCPNQGACATGQGPPPDADVPKIQDRFSRIKHKILILSGKG 68 HSP 2 Score: 26.1794 bits (56), Expect = 3.227e-15 Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALAA 723 +GGVGKST ++ L+ ALA+ Sbjct: 67 KGGVGKSTLTSNLARALAS 85
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_BOVIN (Cytosolic Fe-S cluster assembly factor NUBP1 OS=Bos taurus GN=NUBP1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-14 Identity = 35/63 (55.56%), Postives = 38/63 (60.32%), Query Frame = 3 Query: 486 ENANEHCPGPQSESAGESDDCQGCPNQEACAT-APKGPDPDLVAIAERMATVKHKILVLSGKG 671 E CPG S AG CQGCPNQ CA+ A DP + I E+M TVKHKILVLSGKG Sbjct: 2 EEVPHDCPGADSAQAGRGASCQGCPNQRLCASGAGAAADPAIEEIKEKMKTVKHKILVLSGKG 64 HSP 2 Score: 30.4166 bits (67), Expect = 1.195e-14 Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALA 720 +GGVGKSTFSA L++ LA Sbjct: 63 KGGVGKSTFSAHLAHGLA 80
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_CAEEL (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Caenorhabditis elegans GN=F10G8.6 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.554e-14 Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 477 EIPENANEHCPGPQSESAGESDDCQGCPNQEACATAP-KGPDPDLVAIAERMATVKHKILVLSGKG 671 ++P++AN CPG S AG++ C GCPNQ +CAT PD D+ I +R + +KHKIL+LSGKG Sbjct: 3 DVPDDANAGCPGTGSAGAGKASGCAGCPNQGSCATGQGPPPDADVPKIQDRFSRIKHKILILSGKG 68 HSP 2 Score: 26.1794 bits (56), Expect = 1.554e-14 Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALAA 723 +GGVGKST ++ L+ ALA+ Sbjct: 67 KGGVGKSTLTSNLARALAS 85
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_HUMAN (Cytosolic Fe-S cluster assembly factor NUBP1 OS=Homo sapiens GN=NUBP1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.017e-14 Identity = 35/63 (55.56%), Postives = 38/63 (60.32%), Query Frame = 3 Query: 486 ENANEHCPGPQSESAGESDDCQGCPNQEACAT-APKGPDPDLVAIAERMATVKHKILVLSGKG 671 E CPG S AG CQGCPNQ CA+ A PD + I E+M TVKHKILVLSGKG Sbjct: 2 EEVPHDCPGADSAQAGRGASCQGCPNQRLCASGAGATPDTAIEEIKEKMKTVKHKILVLSGKG 64 HSP 2 Score: 30.4166 bits (67), Expect = 2.017e-14 Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALA 720 +GGVGKSTFSA L++ LA Sbjct: 63 KGGVGKSTFSAHLAHGLA 80
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_DROSI (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Drosophila simulans GN=GD24076 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.073e-11 Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 3 Query: 498 EHCPGPQSESAGESDDCQGCPNQEACATAPKG-PDPDLVAIAERMATVKHKILVLSGKG 671 EHCPG +SE+AG+ C GCPNQ C+ K DP + E M VKHK+L+LSGKG Sbjct: 7 EHCPGVESENAGKGSACSGCPNQGVCSDPNKKLEDPGKALVVESMKDVKHKLLILSGKG 65 HSP 2 Score: 22.3274 bits (46), Expect = 1.073e-11 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALA 720 +GGVGKST ++ L+ LA Sbjct: 64 KGGVGKSTVTSLLTRYLA 81
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_DROSE (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Drosophila sechellia GN=GM17199 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.393e-11 Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 3 Query: 498 EHCPGPQSESAGESDDCQGCPNQEACATAPKG-PDPDLVAIAERMATVKHKILVLSGKG 671 EHCPG +SE AG+ C GCPNQ C+ K DP + E M VKHK+L+LSGKG Sbjct: 7 EHCPGVESEDAGKGSACSGCPNQGVCSDPNKKLEDPGKALVVESMKDVKHKLLILSGKG 65 HSP 2 Score: 22.3274 bits (46), Expect = 1.393e-11 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALA 720 +GGVGKST ++ L+ LA Sbjct: 64 KGGVGKSTVTSLLARYLA 81
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_DROME (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Drosophila melanogaster GN=CG17904 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.808e-11 Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 3 Query: 498 EHCPGPQSESAGESDDCQGCPNQEACATAPKG-PDPDLVAIAERMATVKHKILVLSGKG 671 EHCPG +SE AG+ C GCPNQ C+ K DP + E M VKHK+L+LSGKG Sbjct: 7 EHCPGVESEEAGKGSACSGCPNQGLCSDPNKKLEDPGKALVVESMKDVKHKLLILSGKG 65 HSP 2 Score: 22.3274 bits (46), Expect = 1.808e-11 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALA 720 +GGVGKST ++ L+ LA Sbjct: 64 KGGVGKSTVTSLLTRYLA 81
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_DROER (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Drosophila erecta GN=GG22765 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.808e-11 Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 3 Query: 498 EHCPGPQSESAGESDDCQGCPNQEACATAPKG-PDPDLVAIAERMATVKHKILVLSGKG 671 EHCPG +SE AG++ C GCPNQ C+ K DP + E M VKHK+L+LSGKG Sbjct: 7 EHCPGLESEQAGKASACAGCPNQGVCSDPNKKLEDPGKALVVESMKDVKHKLLILSGKG 65 HSP 2 Score: 22.3274 bits (46), Expect = 1.808e-11 Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALA 720 +GGVGKST ++ L+ LA Sbjct: 64 KGGVGKSTVTSLLTRYLA 81
BLAST of FC876182 vs. ExPASy Swiss-Prot
Match: NUBP1_DROGR (Cytosolic Fe-S cluster assembly factor NUBP1 homolog OS=Drosophila grimshawi GN=GH11560 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.135e-11 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 3 Query: 498 EHCPGPQSESAGESDDCQGCPNQEACATAPKG-PDPDLVAIAERMATVKHKILVLSGKG 671 EHCPG +SE AG C GCPNQ C+ K DP +A M VKHK+L+LSGKG Sbjct: 7 EHCPGVESEQAGRVSACAGCPNQSICSDPTKKLEDPGKALVAAAMKDVKHKLLILSGKG 65 HSP 2 Score: 21.9422 bits (45), Expect = 5.135e-11 Identity = 10/18 (55.56%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 RGGVGKSTFSAQLSYALA 720 +GGVGKST + L+ LA Sbjct: 64 KGGVGKSTVTTLLTRYLA 81 The following BLAST results are available for this feature:
BLAST of FC876182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876182 ID=FC876182; Name=FC876182; organism=Citrus clementina; type=EST; length=731bpback to top |