FC876183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876183 vs. ExPASy Swiss-Prot
Match: FAD6C_SOYBN (Omega-6 fatty acid desaturase, chloroplastic OS=Glycine max PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12 Identity = 44/147 (29.93%), Postives = 70/147 (47.62%), Query Frame = 1 Query: 214 TLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGR 654 TL V +P FE ++++ V+ I+ Y + I + P L LAW W G +TG +V+ H+C H +FS + ++D VG + L+ PY W++ H RHH+ T L D + P W ++ + PL R Sbjct: 100 TLKDVINPLPKEVFEIDDVKAWKSVL----ISVTSYALGLFMISKAPWYLLPLAW--VWT--GTAITGFFVIGHDCAHRSFSSNKLVEDIVGTLAFMPLIYPYEPWRFKHDRHHAKTNMLREDTAWHPV------WKDEFESTPLLR 232
BLAST of FC876183 vs. ExPASy Swiss-Prot
Match: FAD6C_SPIOL (Omega-6 fatty acid desaturase, chloroplastic OS=Spinacia oleracea GN=FAD6 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11 Identity = 37/134 (27.61%), Postives = 67/134 (50.00%), Query Frame = 1 Query: 214 TLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAI 615 T+ + ++P FE + +++ V+ I+ Y + I + P + P+ WA G +TG +V+ H+C H +FS + ++D VG + L+ PY W++ H +HH+ T L D ++P K I Sbjct: 106 TMRDIITSLPKQVFEINDTKAWGTVL----ISVTSYALGIFMIAKAP----WYLLPLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFMPLIYPYEPWRFKHDQHHTKTNMLREDTAWLPIMKEDI 231
BLAST of FC876183 vs. ExPASy Swiss-Prot
Match: FAD6C_ARATH (Omega-6 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD6 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11 Identity = 38/128 (29.69%), Postives = 62/128 (48.44%), Query Frame = 1 Query: 214 TLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVP 597 TL + +P FE L++ V+ I+ Y + I + P + P+ WA G +TG +V+ H+C H +FS + ++D VG + L+ PY W++ H RHH+ T L D + P Sbjct: 106 TLKDIMDTLPKEVFEIDDLKALKSVL----ISVTSYTLGLFMIAKSP----WYLLPLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQP 225
BLAST of FC876183 vs. ExPASy Swiss-Prot
Match: FAD6C_BRANA (Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11 Identity = 37/128 (28.91%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 214 TLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLDDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVP 597 TL + +P FE ++++ V+ I+ Y + I + P + P+ WA G +TG +V+ H+C H +FS + ++D VG + L+ PY W++ H RHH+ T L D + P Sbjct: 101 TLKDIMDTLPKEVFEIDDVKAWKSVL----ISVTSYALGLFMIAKAP----WYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQP 220 The following BLAST results are available for this feature:
BLAST of FC876183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876183 ID=FC876183; Name=FC876183; organism=Citrus clementina; type=EST; length=755bpback to top |