FC876184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 2 Query: 371 KSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPE 658 K + LL +SG+ G L+AIMGPSG+GK+TL+N+LAG + G + +NG P + ++ Y+ Q+D+ LTV+E + ++A L+L E Sbjct: 95 KGYKTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGYRETG----MKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE 188
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 365 SSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQL 652 S K + +L +VS +A+ + AI GPSG+GKTTLL +LAG++ +SG + VNG+P Y+ +V QED F LTV+ETL+ +A L+L Sbjct: 43 SEKEEKVILKDVSCDARSAEITAIAGPSGAGKTTLLEILAGKVSHG---KVSGQVLVNGRPMDGPEYRRVSGFVPQEDALFPFLTVQETLTYSALLRL 137
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: WHITE_ANOAL (Protein white OS=Anopheles albimanus GN=W PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 48/126 (38.10%), Postives = 71/126 (56.35%), Query Frame = 2 Query: 287 GEAPVDGKVF-PVTIR*QN-ITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP--SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQL 652 G+A +DGK P+ R ++ T K + LL NV+G A+ G LLA+MG SG+GKTTLLN LA + ++ + + +NG P + + AYV+Q+DLF LT +E L A L++ Sbjct: 83 GQAAIDGKSREPLCSRLRHCFTRQRLVKDFNPRKHLLKNVTGVARSGELLAVMGSSGAGKTTLLNELAFRSPPGVKISPNAIRTLNGVPVTAEQMRARCAYVQQDDLFIPSLTTKEHLMFQAMLRM 208
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCG1_HUMAN (ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1 PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = 2 Query: 371 KSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPE 658 K + LL +SG+ G L+AIMGPSG+GK+TL+N+LAG + G + +NG P + ++ Y+ Q+D+ LTV+E + ++A L+L E Sbjct: 95 KGYKTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGYRETG----MKGAVLINGLPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQE 188
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCG8_DICDI (ABC transporter G family member 8 OS=Dictyostelium discoideum GN=abcG8 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12 Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 356 SDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSV 670 ++ S++ +L NV G + G L+A+MGPSGSGK+TLL++LA + ++G L VNGK +AYK +YV QED+ TV ETL A+L+LP + + Sbjct: 62 TENSNEKEITILYNVGGVIEKGELVALMGPSGSGKSTLLDILAQRKSTG---KITGQLLVNGK-EIGEAYKKYCSYVTQEDVLLQTYTVFETLKFYADLKLPGVSEI 164
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12 Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 353 LSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQL 652 L D++ V+ +L V+ AKP +LAI+GPSG+GK++LL +LA +L+ +G + VN +P +K YV Q+D F LTV ETL +A+L+L Sbjct: 51 LEDETGNKVKHVLKGVTCRAKPWEILAIVGPSGAGKSSLLEILAARLIPQ-----TGSVYVNKRPVDRANFKKISGYVTQKDTLFPLLTVEETLLFSAKLRL 147
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCGI_DICDI (ABC transporter G family member 18 OS=Dictyostelium discoideum GN=abcG18 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 52/154 (33.77%), Postives = 86/154 (55.84%), Query Frame = 2 Query: 224 DDDSAYGDDDERNDVAEANGDGEAPVDGKVFPVT--IR*QNITCSLS-DKSSKSVRF-LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK-FAYVRQEDLFFSQLTVRETLSLAAELQLPEILSV 670 +DDS G++ E DV + G+A + K P+ ++ +++ + K K+ R LLN ++G KPG L+A+MGPSG+GK+TLL+VLA + H G + +NG+ + + AYV Q D+ TVRE + +A+ +LP + + Sbjct: 774 NDDSDSGEEMESVDV-DVKSSGKANLR-KDIPIGCYMQWKDLVYEVDVKKDGKNQRLRLLNGINGYVKPGMLVALMGPSGAGKSTLLDVLANRKTGG---HTKGQILINGQERTKYFTRTSAYVEQMDILTPVSTVREVILFSAKNRLPNSVPI 922
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: YN99_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YNR070W OS=Saccharomyces cerevisiae GN=YNR070W PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11 Identity = 45/137 (32.85%), Postives = 81/137 (59.12%), Query Frame = 2 Query: 254 ERNDVAEANGDG-EAPVDGKVFPVTIR*QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPE 658 + ++A +N D A +G +N++ ++ S + R LL++VSG PG L A++G SG+GKTTLLN LA + + + ++G + V+G P ++ + YV+Q+DL ++LTV+E+L +A ++ P+ Sbjct: 704 DMKEIASSNDDSTSADFEGLESTGVFIWKNVSFTIPHSSGQ--RKLLDSVSGYCVPGTLTALIGESGAGKTTLLNTLAQRNVGT----ITGDMLVDGLPMDASFKRRTGYVQQQDLHVAELTVKESLQFSARMRRPQ 834
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11 Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 383 FLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLP 655 F+L N++ A P +LA++GPSG+GK+TLL++LA + SP SG + +N P + +Y+ +YV Q D FF LTV ET S AA L LP Sbjct: 43 FILRNITLTAHPTEILAVVGPSGAGKSTLLDILASK--TSP---TSGSILLNSIPINPSSYRKISSYVPQHDSFFPLLTVSETFSFAACLLLP 130
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: PDR12_YEAST (ATP-dependent permease PDR12 OS=Saccharomyces cerevisiae GN=PDR12 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 374 SVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP---SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQ 649 + R LL++V G KPG++ A+MG SG+GKTTLLNVLA ++ ++G + VN KP S N++ YV Q D ++L+VRE+L AAEL+ Sbjct: 856 ATRKLLSDVFGYVKPGKMTALMGESGAGKTTLLNVLAQRINMGV---ITGDMLVNAKPLPASFNRS--CGYVAQADNHMAELSVRESLRFAAELR 945 The following BLAST results are available for this feature:
BLAST of FC876184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876184 ID=FC876184; Name=FC876184; organism=Citrus clementina; type=EST; length=671bpback to top |