FC876184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCGJ_DICDI (ABC transporter G family member 19 OS=Dictyostelium discoideum GN=abcG19 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 48/112 (42.86%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 335 QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAEL-QLPEIL 664 QNI ++ K K R LL+NV G KPG++ A+MG SG+GKTTLL+VLA + + G +NGKP + YV Q D+ LTVRE L +A+L Q P +L Sbjct: 821 QNINYTVPVKGGK--RLLLDNVEGWIKPGQMTALMGSSGAGKTTLLDVLAKRKTMG---EVQGKCFLNGKPLEIDFERITGYVEQMDVHNPGLTVREALRFSAKLRQEPSVL 927
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: ABCG2_DICDI (ABC transporter G family member 2 OS=Dictyostelium discoideum GN=abcG2 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 362 KSSKSVRF-LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF-AYVRQEDLFFSQLTVRETLSLAAELQLP 655 K K+ R LLN ++G KPG LLA+MGPSG+GK+TLL+VLA + H G + +NG+ + + AYV Q D+ TV+E + +A+ +LP Sbjct: 728 KDGKNQRLRLLNEINGYVKPGMLLALMGPSGAGKSTLLDVLANRKTGG---HTKGQILINGQERTKYFTRLSAYVEQFDVLPPTQTVKEAILFSAKTRLP 824
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11 Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPE 658 LL+NVSG PG L A++G SG+GKTTL++VLAG+ + G + ++G P + + YV Q D+ Q+TV E+L +A L+LP+ Sbjct: 853 LLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YTEGDIRISGHPKEQQTFARISGYVEQNDIHSPQVTVEESLWFSASLRLPK 942
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: WHT1_CAEEL (ABC transporter ATP-binding protein/permease wht-1 OS=Caenorhabditis elegans GN=wht-1 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 37/96 (38.54%), Postives = 63/96 (65.62%), Query Frame = 2 Query: 371 KSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQL 652 + V+ +L+NVSG A+ G+LLAI+G SG+GKTTL+NVL + + + L + G + ++G+ ++ + A+V+Q D+F +T RE L A L++ Sbjct: 4 RRVKEILHNVSGMAESGKLLAILGSSGAGKTTLMNVLTSRNLTN--LDVQGSILIDGRRANKWKIREMSAFVQQHDMFVGTMTAREHLQFMARLRM 97
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPE 658 LL VSG +PG L A+MG SG+GKTTL++VLAG+ ++ G + ++G P + + Y Q D+ Q+TV E+L +A L+LPE Sbjct: 887 LLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGSINISGYPKKQETFARVSGYCEQNDIHSPQVTVYESLLFSAWLRLPE 976
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 386 LLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLPE 658 LL VSG +PG L A+MG SG+GKTTL++VLAG+ ++ G + ++G P + + Y Q D+ Q+TV E+L +A L+LPE Sbjct: 887 LLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YIEGSINISGYPKKQETFARVSGYCEQNDIHSPQVTVYESLLFSAWLRLPE 976
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: BFR1_SCHPO (Brefeldin A resistance protein OS=Schizosaccharomyces pombe GN=bfr1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 50/148 (33.78%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 230 DSAYGDDDERNDVAEANGDGEAPVDGKVFPVT-----IR*QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLP 655 D G D + DV + + D E ++ + + +N+ + K R LLN V G PG+L A+MG SG+GKTTLLNVLA ++ ++G + VNG+ S + YV+Q+D+ + TVRE L +A L+ P Sbjct: 845 DLETGQDTQGGDVVKESPDNEEELNKEYEGIEKGHDIFSWRNLNYDIQIKGEH--RRLLNGVQGFVVPGKLTALMGESGAGKTTLLNVLAQRVDTGV---VTGDMLVNGRGLDSTFQRRTGYVQQQDVHIGESTVREALRFSAALRQP 987
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 383 FLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILS 667 F+L N++ + P ++LAI+GPSG+GK+TLL++LA + + L + +N PSS + +YV Q D FF LTV ET + +A L LP+ LS Sbjct: 29 FILRNITLTSHPSQILAIIGPSGAGKSTLLDILAARTSPTSGSILLNSVLIN--PSSYRKIS-SYVPQHDTFFPLLTVSETFTFSASLLLPKNLS 120
BLAST of FC876184 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.743e-11 Identity = 42/115 (36.52%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 317 PVTIR*QNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYK--FAYVRQEDLFFSQLTVRETLSLAAELQLP 655 P+T+ QN+ + K+ R LL++++G KPG L ++MG SG+GKTTLL+VL+G+ R + G ++V G P + + Y Q D+ +TV E+L +A L+LP Sbjct: 805 PLTVTFQNVQYYIETPQGKT-RQLLSDITGALKPGVLTSLMGVSGAGKTTLLDVLSGR---KTRGIIKGEIKVGGYPKVQETFARVSGYCEQFDIHSPNITVEESLKYSAWLRLP 915 The following BLAST results are available for this feature:
BLAST of FC876184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876184 ID=FC876184; Name=FC876184; organism=Citrus clementina; type=EST; length=671bpback to top |