FC876185
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_LACRJ (Elongation factor Tu OS=Lactobacillus reuteri (strain JCM 1112) GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 78/226 (34.51%), Postives = 111/226 (49.12%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSXNLDWYKGPTLLDALDN-INEPERP 666 +NI IGHVD GK+T T + L AA+ ++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D D + EV L + + + VP V + EGD E+ L+D +D+ I P+RP Sbjct: 14 VNIGTIGHVDHGKTTLTAAITKVL--------------AAKGLAKAEDYADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKTDLVD---DDELVDLVEMEVRDLLSEYDFPGDDVPVVRGSALKALEGDPEQEKVI-------LHLMDVIDDYIPTPKRP 207
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_LACRD (Elongation factor Tu OS=Lactobacillus reuteri (strain DSM 20016) GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 78/226 (34.51%), Postives = 111/226 (49.12%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSXNLDWYKGPTLLDALDN-INEPERP 666 +NI IGHVD GK+T T + L AA+ ++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D D + EV L + + + VP V + EGD E+ L+D +D+ I P+RP Sbjct: 14 VNIGTIGHVDHGKTTLTAAITKVL--------------AAKGLAKAEDYADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKTDLVD---DDELVDLVEMEVRDLLSEYDFPGDDVPVVRGSALKALEGDPEQEKVI-------LHLMDVIDDYIPTPKRP 207
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_CLONN (Elongation factor Tu OS=Clostridium novyi (strain NT) GN=tuf1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 64/197 (32.49%), Postives = 96/197 (48.73%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF----EGDN 579 +NI IGHVD GK+TTT + L ++ +E +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L + G++ ++ P V S EGD+ Sbjct: 13 VNIGTIGHVDHGKTTTTAAITMTLAKAGGAEVQNYED---------------IDKAPEEKERGITINTSHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVNHIVVFLNKADQVD---DPELLELVEMEVRELLSEYGFDGDECPVVVGSALKAIEEGDD 184
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU2_STRAW (Elongation factor Tu 2 OS=Streptomyces avermitilis GN=tuf2 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 75/225 (33.33%), Postives = 107/225 (47.56%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSXNLDWYKGPTLLDALDN-INEPER 663 +NI +GHVD GK+T T + K AE +F +D+ E RGITI+IA ++ET + +D PGH D++KNM+TG +Q D A+L++ + G QT EH LLA +GV ++ NK DA + + D + EV L GY + VP V +SG EGD + + LLDA+D + PER Sbjct: 13 LNIGTMGHVDHGKTTLTAAIT---------------KVLAERGSGTFVPFDRIDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRELLTAHGYGGDSVPVVRVSGLKALEGDPRWTAAID-------ALLDAVDTYVPMPER 204
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU1_THETH (Elongation factor Tu-A OS=Thermus thermophilus GN=tufA PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 74/220 (33.64%), Postives = 104/220 (47.27%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNL-----DWY-KGPTLLDALD 642 +N+ IGHVD GK+T T L Y AAE K +DK ER RGITI+ A ++ET K + + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L + + ++VP + S + R+ +W K LLDA+D Sbjct: 13 VNVGTIGHVDHGKTTLTAALTYVA--------------AAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAID 208
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU1_THET8 (Elongation factor Tu-A OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=tufA PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20 Identity = 74/220 (33.64%), Postives = 104/220 (47.27%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNL-----DWY-KGPTLLDALD 642 +N+ IGHVD GK+T T L Y AAE K +DK ER RGITI+ A ++ET K + + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L + + ++VP + S + R+ +W K LLDA+D Sbjct: 13 VNVGTIGHVDHGKTTLTAALTYVA--------------AAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAID 208
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_THEEB (Elongation factor Tu OS=Thermosynechococcus elongatus (strain BP-1) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.379e-20 Identity = 71/228 (31.14%), Postives = 112/228 (49.12%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG-DNMIERSXNL----DWY-KGPTLLDALDN-INEPER 663 +N+ IGHVD GK+T T + L K ++++ +D E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + + E+ L + + ++VP + SG + + M L +W K L+DA+DN I PER Sbjct: 13 VNVGTIGHVDHGKTTLTAAITMTLAAQGKAQARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAMP-------QTKEHILLARQVGVPSIVVFLNKVDMVD---DEELLELVELELRELLNEYEFPGDEVPIIRGSGLKALEAMTANPKTLRGENEWVDKIYELMDAVDNYIPTPER 215
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_SULNB (Elongation factor Tu OS=Sulfurovum sp. (strain NBC37-1) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.379e-20 Identity = 71/223 (31.84%), Postives = 105/223 (47.09%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDW-YKGPTLLDALDN-INEPER 663 INI IGHVD GK+T T + L + ++ +D ERERGITI + ++ET + +D PGH D++KNMITG +Q D A+L+I +T G QTREH LL+ +GV ++ NK D + + + + EV L + + + P V S F+ + +W K L+DA+D I EP+R Sbjct: 13 INIGTIGHVDHGKTTLTAAITAVLAVAGDTELMDYD---------------AIDNAPEERERGITIATSHVEYETATRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAATDGPM-------AQTREHILLSKQVGVPYIVVFLNKEDQLDDEDKEEMLELVEMEVRELLSEYDFPGDDTPIVAGSAFQALEEAKTGTLGEWSAKIMELMDAVDEYIPEPKR 213
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_RICBR (Elongation factor Tu OS=Rickettsia bellii (strain RML369-C) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.379e-20 Identity = 70/231 (30.30%), Postives = 114/231 (49.35%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSXNLDWYKGPTLLDALDN-----INEPERP 666 +NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + + EG E++ + L+DA+D+ I E E+P Sbjct: 13 VNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQALEGKPEGEKAIH-------ELMDAVDSYIPQPIRETEKP 211
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_RICB8 (Elongation factor Tu OS=Rickettsia bellii (strain OSU 85-389) GN=tuf PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.379e-20 Identity = 70/231 (30.30%), Postives = 114/231 (49.35%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSXNLDWYKGPTLLDALDN-----INEPERP 666 +NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + + EG E++ + L+DA+D+ I E E+P Sbjct: 13 VNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPIIRGSALQALEGKPEGEKAIH-------ELMDAVDSYIPQPIRETEKP 211 The following BLAST results are available for this feature:
BLAST of FC876185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876185 ID=FC876185; Name=FC876185; organism=Citrus clementina; type=EST; length=667bpback to top |