FC876185
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_LACBA (Elongation factor Tu OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=tuf PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 71/200 (35.50%), Postives = 100/200 (50.00%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIER 591 +NI IGH+D GK+T T I K + ++ +A + YA + D ERERGITI+ A ++ET K + IDAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P + + EGD E+ Sbjct: 14 VNIGTIGHIDHGKTTLTA-------AITKVLADKGLAKAED-------YADI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYIVVFLNKTDLVD---DDELVDLVEMEVRELLSEYDYPGDDIPVIRGSALKALEGDEEQEK 188
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_DEIGD (Elongation factor Tu OS=Deinococcus geothermalis (strain DSM 11300) GN=tuf1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 71/228 (31.14%), Postives = 110/228 (48.25%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKGP------TLLDALD-NINEPER 663 +N+ IGHVD GK+T T + + +D V EK A + +DK E+ RGITI+ A ++ T + + +D PGH D++KNMITG +Q D A+L++ S G QTREH LLA +GV ++ NK+D + + + EV L K + + +P + S + ++++ + P LLDA+D I PER Sbjct: 13 VNVGTIGHVDHGKTTLTAAITFTAAAMDPTV----EKLAYDQ----------IDKAPEEKARGITINTAHVEYNTPARHYSHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DEELLELVEMEVRELLSKYEFPGDDLPVIKGSALQALEALQQNPKTARGENPWVDKIWELLDAIDAYIPTPER 216
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBM (Elongation factor Tu OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tuf1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 75/224 (33.48%), Postives = 111/224 (49.55%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKG-PTLLDALDN-INEPER 663 +NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I PER Sbjct: 13 VNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPER 207
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBL (Elongation factor Tu OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tuf1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 75/224 (33.48%), Postives = 111/224 (49.55%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKG-PTLLDALDN-INEPER 663 +NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I PER Sbjct: 13 VNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPER 207
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBK (Elongation factor Tu OS=Clostridium botulinum (strain Okra / Type B1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 75/224 (33.48%), Postives = 111/224 (49.55%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKG-PTLLDALDN-INEPER 663 +NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I PER Sbjct: 13 VNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPER 207
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBH (Elongation factor Tu OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 75/224 (33.48%), Postives = 111/224 (49.55%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKG-PTLLDALDN-INEPER 663 +NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I PER Sbjct: 13 VNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPER 207
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_CLOB1 (Elongation factor Tu OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 75/224 (33.48%), Postives = 111/224 (49.55%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKG-PTLLDALDN-INEPER 663 +NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I PER Sbjct: 13 VNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPER 207
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPN (Elongation factor Tu OS=Chlamydia pneumoniae GN=tuf PE=3 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 74/225 (32.89%), Postives = 110/225 (48.89%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD-NMIERSXNLDWYKGPTLLDALDNINEPER 663 INI IGHVD GK+T T + L G SF+ +D E+ RGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+S L++ GY + P + + EGD N IE+ L + DNI PER Sbjct: 13 INIGTIGHVDHGKTTLTAAITRALSGD---------------GLASFRDYSSIDNTPEEKARGITINASHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKVDMISQEDAEL-IDLVEMELSELLEEKGY--KGCPIIRGSALKALEGDANYIEKVREL-------MQAVDDNIPTPER 205
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_CHICK (Elongation factor Tu, mitochondrial (Fragment) OS=Gallus gallus GN=TUFM PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 64/185 (34.59%), Postives = 94/185 (50.81%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 552 +N+ IGHVD GK+T T + L +R+E +DK ER RGITI+ A ++ T + + D PGH D++KNMITGT+ D +L++ +T G QTREH LLA +GV+ ++ NK DA S A +V+ E+ L ++GY+ E+ P V Sbjct: 48 VNVGTIGHVDHGKTTLTAAITKVLSESGGARFQRYED---------------IDKAPEERARGITINAAHVEYSTARRHYAHTDCPGHADYVKNMITGTAPLDGCILVVAATDGQMP-------QTREHLLLARQVGVRHVVVYVNKADAV----SDAELLPLVELELRELLAEMGYDAERTPVV 206
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU2_STRRA (Elongation factor Tu-2 OS=Streptomyces ramocissimus GN=tuf2 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 77/225 (34.22%), Postives = 109/225 (48.44%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSXNLDWYKGPTLLDALDN-INEPER 663 +NI IGH+D GK+T T I K + +RF + F +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + + VP V +S EGD RS LLDA+D + EP R Sbjct: 13 VNIGTIGHIDHGKTTLTA-------AITKVLHDRFP------DLNPFTPFDQIDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKTDMVD---DEEILELVELEVRELLTEYEFPGDDVPVVKVSALRALEGDPRWTRSV-------LELLDAVDEFVPEPVR 207 The following BLAST results are available for this feature:
BLAST of FC876185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876185 ID=FC876185; Name=FC876185; organism=Citrus clementina; type=EST; length=667bpback to top |