FC876185
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU1_STRCU (Elongation factor Tu-1 OS=Streptomyces collinus GN=tuf1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 75/225 (33.33%), Postives = 111/225 (49.33%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKGP-TLLDALD-NINEPER 663 +NI IGH+D GK+T T I K + + F EA+ ++ +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD +W + L+ A+D NI EPER Sbjct: 13 VNIGTIGHIDHGKTTLTA-------AITKVLHDAFPDLNEASAFDQ--------IDKAPEERQRGITISIAHVEYQTETRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSEYEFPGDDLPVVRVSALKALEGDK--------EWGQSVLNLMQAVDENIPEPER 207
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPW (Elongation factor Tu OS=Synechococcus sp. (strain WH7803) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 70/223 (31.39%), Postives = 106/223 (47.53%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG-DNMIERSXNLDWYKGPTLLDALD-NINEPER 663 +NI IGHVD GK+T T + L + ++ + +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P V +SG + + E +D L+ A+D NI EPER Sbjct: 13 VNIGTIGHVDHGKTTLTAAITNVLAKKGQAKVQDYAD---------------IDGAPEERERGITINTAHVEYETDTRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPVVQVSGLKAIEGEAEWEAKID-----ELMQAVDANIPEPER 205
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_MYCUA (Elongation factor Tu OS=Mycobacterium ulcerans (strain Agy99) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 79/231 (34.20%), Postives = 116/231 (50.22%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSXNLDWYKGPTLLDALDN-----INEPERP 666 +NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L+DA+D + E +RP Sbjct: 13 VNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDPKWVESVE-------QLMDAVDESIPDPVRETDRP 211
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS2 (Elongation factor Tu OS=Mycobacterium smegmatis GN=tuf PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 79/227 (34.80%), Postives = 118/227 (51.98%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSXNLDWYKG-PTLLDALD-NINEPER 663 +NI IGHVD GK+T T I K + ++F ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E+ P V +S EGD W K L++A+D +I +P R Sbjct: 13 VNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELIELVEMEVRELLAAQDFD-EEAPVVRVSALKALEGDP--------KWVKSVEELMEAVDASIPDPVR 206
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPE (Elongation factor Tu OS=Mycoplasma penetrans GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 66/196 (33.67%), Postives = 99/196 (50.51%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGD 576 +NI IGH+D GK+T T + L A + ++ KY + DK E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ ++ G QTREH LLA +GV +M+ NK D S A ++V+ EV L G++ + P + + EGD Sbjct: 13 VNIGTIGHIDHGKTTLTAAICTYL--------------AKKGGAKAMKYDEI-DKAPEEKARGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAASDGPMP-------QTREHILLARQVGVPKMVVFLNKCDMV----SDAEMQDLVEMEVRELLSSYGFDGDNTPVIRGSALKALEGD 182
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_MYCMM (Elongation factor Tu OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 79/231 (34.20%), Postives = 116/231 (50.22%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSXNLDWYKGPTLLDALDN-----INEPERP 666 +NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD S L+DA+D + E +RP Sbjct: 13 VNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGDPKWVESVE-------QLMDAVDESIPDPVRETDRP 211
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_MYCLE (Elongation factor Tu OS=Mycobacterium leprae GN=tuf PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 79/232 (34.05%), Postives = 117/232 (50.43%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSXNLDWYKGPT-LLDALDN-----INEPERP 666 +NI IGHVD GK+T T I K + ++F +N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W + T L+DA+D + E ++P Sbjct: 13 VNIGTIGHVDHGKTTLTA-------AITKVLHDKFPN----LNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGD--------AKWVESVTQLMDAVDESIPAPVRETDKP 211
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_MYCLB (Elongation factor Tu OS=Mycobacterium leprae (strain Br4923) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 79/232 (34.05%), Postives = 117/232 (50.43%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSXNLDWYKGPT-LLDALDN-----INEPERP 666 +NI IGHVD GK+T T I K + ++F +N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W + T L+DA+D + E ++P Sbjct: 13 VNIGTIGHVDHGKTTLTA-------AITKVLHDKFPN----LNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGD--------AKWVESVTQLMDAVDESIPAPVRETDKP 211
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_MYCGE (Elongation factor Tu OS=Mycoplasma genitalium GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 576 +N+ IGH+D GK+T T + L K R+++ +DK E+ RGITI+ A ++ + K + +D PGH D+IKNMITG +Q D A+L++ +T S QTREH LLA +GV +M+ NK D + + + + + +EV L G++ + P + + EGD Sbjct: 13 VNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDE---------------IDKAPEEKARGITINSAHVEYSSDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSATD-------SVMPQTREHILLARQVGVPKMVVFLNKCDIASDEEVQ---ELVAEEVRDLLTSYGFDGKNTPIIYGSALKALEGD 182
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_LACH4 (Elongation factor Tu OS=Lactobacillus helveticus (strain DPC 4571) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 77/225 (34.22%), Postives = 105/225 (46.67%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSXNLDWYKGPTLLDALDN-INEPER 663 +NI IGHVD GK+T T + L EK A+ S +D E+ERGITI+ A ++ET K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P V + EGD + L+D +D I PER Sbjct: 14 VNIGTIGHVDHGKTTLTAAITTVLA----------EKGLAKAEDYS-----QIDAAPEEKERGITINTAHVEYETEKRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKCDLVD---DPELIDLVEMEVRDLLTEYDYPGDDIPVVRGSALKALEGDKEAQEQI-------LKLMDTVDEYIPTPER 206 The following BLAST results are available for this feature:
BLAST of FC876185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876185 ID=FC876185; Name=FC876185; organism=Citrus clementina; type=EST; length=667bpback to top |