FC876185
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_EUBE2 (Elongation factor Tu OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 74/224 (33.04%), Postives = 105/224 (46.88%), Query Frame = 1 Query: 4 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKGPTLLDALDNINE----PER 663 NI IGHVD GK+T T I K + ER A + +DK ERERGITI A ++ET K + +D PGH D++KNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D D ++E+ L + G+ + P + S + N +W G +L+ + I+E PER Sbjct: 14 NIGTIGHVDHGKTTLTA-------AITKTLHERLGTGEAVAFEN-------IDKAPEERERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVAATDGVM-------AQTREHILLARQVGVPYIVVFMNKCDMVDDPELLELVDMEIREL---LNEYGFPGDDTPIIQGSALKA----LEDPNSEW--GDKILELMHTIDEYVPDPER 207
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_DICDI (Elongation factor Tu, mitochondrial OS=Dictyostelium discoideum GN=tufm PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 63/185 (34.05%), Postives = 95/185 (51.35%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 552 +N+ IGHVD GK+T T + K ++ +FK +DK E+ RGITI + ++E+ + ID PGH+ +IKNMITG +Q D A+L++ + G E QTREH +L+ +G+ ++ NKMD P EIV+ EV L + G+N ++ PFV Sbjct: 39 VNVGTIGHVDHGKTTLTAAIT---------------KTLSDRGLANFKSYAQIDKSPEEKARGITITASHIEYESATRHYAHIDCPGHQHYIKNMITGAAQMDGAILVVSAPDGPQE-------QTREHIILSREVGIPALVVFLNKMDNADPDLV-----EIVEMEVRELLSQYGFNGDETPFV 196
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 64/184 (34.78%), Postives = 91/184 (49.46%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 552 +NI IGHVD GK+T T + L A E ++F Y + DK E+ERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D D + EV L + G+ + P V Sbjct: 13 VNIGTIGHVDHGKTTLTAAITTIL--------------AKEGKAKAFNYEEI-DKAPEEKERGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEYIVVFLNKADQVD---DPELIDLVEMEVRELLNEYGFPGDDTPIV 171
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_BORBZ (Elongation factor Tu OS=Borrelia burgdorferi (strain ZS7) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 69/222 (31.08%), Postives = 114/222 (51.35%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKGPTLLDALDN-INEPER 663 +N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G++ + P + S F + E + K LL+++DN + PER Sbjct: 13 MNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGFSAD-TPIIKGSAFGAMSNPEDPESTKCVK--ELLESMDNYFDLPER 206
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_BORBU (Elongation factor Tu OS=Borrelia burgdorferi GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 69/222 (31.08%), Postives = 114/222 (51.35%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKGPTLLDALDN-INEPER 663 +N+ IGHVD GK+T T + ++K + ++ KY + D E+ RGITI+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + +G + QT+EH LLA +G+K++I NK+D P+ + + EV ++K G++ + P + S F + E + K LL+++DN + PER Sbjct: 13 MNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGFSAD-TPIIKGSAFGAMSNPEDPESTKCVK--ELLESMDNYFDLPER 206
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU2_MYXXD (Elongation factor Tu 2 OS=Myxococcus xanthus (strain DK 1622) GN=tuf2 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 63/195 (32.31%), Postives = 97/195 (49.74%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGD 576 +NI IGHVD GK++ T + K A+ +F ++DK ERERGITI + +++T+ + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + EV LKK + + +P +P + EGD Sbjct: 13 VNIGTIGHVDHGKTSLTAAIT---------------KVLAKTGGATFLAYDLIDKAPEERERGITISTSHVEYQTSNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDDIPIIPGSALKALEGD 182
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU1_MYXXD (Elongation factor Tu 1 OS=Myxococcus xanthus (strain DK 1622) GN=tuf1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20 Identity = 63/195 (32.31%), Postives = 97/195 (49.74%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGD 576 +NI IGHVD GK++ T + K A+ +F ++DK ERERGITI + +++T+ + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + EV LKK + + +P +P + EGD Sbjct: 13 VNIGTIGHVDHGKTSLTAAIT---------------KVLAKTGGATFLAYDLIDKAPEERERGITISTSHVEYQTSNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDDIPIIPGSALKALEGD 182
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_STIAU (Elongation factor Tu OS=Stigmatella aurantiaca GN=tuf PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.301e-20 Identity = 64/195 (32.82%), Postives = 95/195 (48.72%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGD 576 +NI IGHVD GK++ T + K A+ +F +DK ERERGITI A +++T + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + EV LKK + + +P +P + EGD Sbjct: 13 VNIGTIGHVDHGKTSLTAAIT---------------KVLAKTGGATFLAYDQIDKAPEERERGITISTAHVEYQTKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDSIPIIPGSALKALEGD 182
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_SOLUE (Elongation factor Tu OS=Solibacter usitatus (strain Ellin6076) GN=tuf1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.301e-20 Identity = 73/223 (32.74%), Postives = 105/223 (47.09%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSXNLDWYKG-PTLLDALDN-INEPER 663 +NI IGH+D GK+T T + L A K F+ +D E+ RGITI +A ++ET K + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK+D D + EV LK + + +P V +S N W K L++A+D+ I PER Sbjct: 13 VNIGTIGHIDHGKTTLTAAITKVL--------------AKHNPKNKFRSFDSIDNAPEEKARGITIAVAHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAIVVVAATDGPMP-------QTREHILLARQVGVPYIVVAMNKVDMVD---DSELLDLVELEVRELLKSYQFPGDDLPVVRVSALGALN-----GEPQWEKTVDELMEAVDSYIPMPER 206
BLAST of FC876185 vs. ExPASy Swiss-Prot
Match: EFTU_RICPA (Elongation factor Tu OS=Rickettsia parkeri GN=tuf PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.301e-20 Identity = 71/228 (31.14%), Postives = 108/228 (47.37%), Query Frame = 1 Query: 1 INIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSXNLDWYKGPTLLDALDN-INEPER 663 +NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ +++P + + EG E++ N L+DA+D+ I +P R Sbjct: 13 VNIGTIGHVDHGKTSLTAAITIVLAKTGGAQATAYDQ------------------IDAAPEEKERGITISTAHVEYETKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DSDLLELVEMEVRELLSKYGFPGDEIPIIKGSALQALEGKPEGEKAIN-------ELMDAVDSYIPQPVR 205 The following BLAST results are available for this feature:
BLAST of FC876185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876185 ID=FC876185; Name=FC876185; organism=Citrus clementina; type=EST; length=667bpback to top |