FC876187
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_KLULA (Farnesyl pyrophosphate synthetase OS=Kluyveromyces lactis GN=FPS1 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.727e-54 Identity = 114/208 (54.81%), Postives = 146/208 (70.19%), Query Frame = 2 Query: 116 MSDLKSRFIEVYGVLKQELLNDPA-FEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGK---ELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLS-----NHRRIVQYKTAYYSFYLPVACAL 712 MSD +++F+EV+ L QEL + A + ++ +W ++ L+YN PGGKLNRGLSVVD+Y LLK K EL+ +E+ + LGWCIE LQAYFLV DD+MD S TRRGQPCW++V VG IA ND +L I +LK HFR +PYYVDLL+LF++V FQT GQ++DLIT E + DLS H IV +KTAYYSFYL VA A+ Sbjct: 1 MSDNRAQFLEVFPSLVQELRDILAGYGMPEEAIEWYEKSLNYNTPGGKLNRGLSVVDTYALLKGYKSVSELSAEEYKKVAILGWCIELLQAYFLVADDMMDQSITRRGQPCWYKVENVGDIAINDAFMLEGAIYCLLKKHFRTEPYYVDLLELFHDVTFQTELGQLLDLITAPEDKVDLSKFSLEKHSFIVIFKTAYYSFYLAVALAM 208
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_YEAST (Farnesyl pyrophosphate synthetase OS=Saccharomyces cerevisiae GN=FPP1 PE=1 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 1.325e-51 Identity = 106/203 (52.22%), Postives = 141/203 (69.46%), Query Frame = 2 Query: 128 KSRFIEVYGVLKQEL-LNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLL--KEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLS-----NHRRIVQYKTAYYSFYLPVACAL 712 + RF+ V+ L +EL + A+ ++ W L+YN PGGKLNRGLSVVD+Y +L K ++L +E+ + LGWCIE LQAYFLV DD+MD S TRRGQPCW++VP+VG IA ND +L I ++LK+HFR++ YY+D+ +LF+EV FQT GQ++DLIT E + DLS H IV +KTAYYSFYLPVA A+ Sbjct: 9 RERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVVDTYAILSNKTVEQLGQEEYEKVAILGWCIELLQAYFLVADDMMDKSITRRGQPCWYKVPEVGEIAINDAFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDKVDLSKFSLKKHSFIVTFKTAYYSFYLPVALAM 211
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_NEUCR (Farnesyl pyrophosphate synthetase OS=Neurospora crassa GN=fpp PE=3 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 2.421e-45 Identity = 101/206 (49.03%), Postives = 132/206 (64.08%), Query Frame = 2 Query: 113 KMSDLKSRFIEVYGVLKQELLN-DPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACAL 712 K + LK F V+ L++ LL A++ W + L+ N GGK NRG+SV DS +L G+ LT++E+F ++ LGW E LQA+FLV DDIMD S TRRG+PCW+R VGM+A ND +L + I +LK +FR P YVD L+LF+EV FQT GQ+ DL+T E + DL N + IV YKTAYYSFYLPVA A+ Sbjct: 3 KTTTLKE-FESVFPKLEEALLEYAKAYKLPEQMLSWYKQSLEVNTLGGKCNRGMSVPDSASILL-GRPLTEEEYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGKPCWYRQEGVGMVAINDAFMLESAIYTLLKKYFRSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKVDLDNFSMDKYTFIVIYKTAYYSFYLPVALAM 206
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_GIBFU (Farnesyl pyrophosphate synthetase OS=Gibberella fujikuroi GN=FPPS PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.044e-45 Identity = 99/198 (50.00%), Postives = 127/198 (64.14%), Query Frame = 2 Query: 137 FIEVYGVLKQELLNDP-AFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACAL 712 F VY L++ LL+ +++ + W R L+ N GGK NRG+SV DS LL E K LT++++F ++ LGW E LQA+FLV DDIMD S TRRGQPCW+R VGMIA ND +L + I +LK +FR P Y DL++ F+E FQT GQ+ DL+T E +L N + IV YKTAYYSFYLPVA AL Sbjct: 10 FNSVYPKLEEALLDHARSYKLPQEQLDWYKRSLEVNPLGGKCNRGMSVPDSVSLLLE-KPLTEEQYFQAATLGWMTELLQAFFLVSDDIMDSSITRRGQPCWYRQEGVGMIAINDAFMLESAIYTLLKKYFRSHPAYFDLIESFHETTFQTELGQLCDLLTAPEDNVNLDNFSLEKYSFIVIYKTAYYSFYLPVALAL 206
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_SCHPO (Farnesyl pyrophosphate synthetase OS=Schizosaccharomyces pombe GN=fps1 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.566e-44 Identity = 94/203 (46.31%), Postives = 126/203 (62.07%), Query Frame = 2 Query: 122 DLKSRFIEVYGVLKQELLND-PAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLS-----NHRRIVQYKTAYYSFYLPVACAL 712 D +++F V E++N D +W L +N GGK NRGLSV+DSY +L G L + + ++ LGW +E LQ++FL+ DDIMD S TRRGQPCW+ +P VG IA ND ++ + I +LK HFR + YVDL++LF++V FQT GQ +DL+T E DLS H IV YKTA+YSFYLPVA A+ Sbjct: 5 DKRAKFESALPVFVDEIVNYLKTINIPDDVTEWYKNSLFHNTLGGKYNRGLSVIDSYEILL-GHPLDEAAYMKAAVLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPGVGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKFSLQKHSFIVIYKTAFYSFYLPVALAM 206
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_RAT (Farnesyl pyrophosphate synthetase OS=Rattus norvegicus GN=Fdps PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.125e-42 Identity = 88/197 (44.67%), Postives = 131/197 (66.50%), Query Frame = 2 Query: 137 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDL-----SNHRRIVQYKTAYYSFYLPVACAL 712 F ++ VL ++ L P D+ + +L+YN GGK NRGL+VV +++ L E ++ + + +GWC+E LQA+FLVLDDIMD S+TRRGQ CW++ P +G+ A ND +LL I R+LK + R++PYY++LL+LF + +QT GQ +DLIT +G+ DL ++ IV+YKTA+YSFYLP+A A+ Sbjct: 21 FSQIVKVLTEDELGHPE---KGDAITRIKEVLEYNTVGGKYNRGLTVVQTFQELVEPRKQDAESLQRALTVGWCVELLQAFFLVLDDIMDSSYTRRGQICWYQKPGIGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQGQVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAM 214
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_BOVIN (Farnesyl pyrophosphate synthetase OS=Bos taurus GN=FDPS PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.918e-42 Identity = 91/202 (45.05%), Postives = 128/202 (63.37%), Query Frame = 2 Query: 122 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDL-----SNHRRIVQYKTAYYSFYLPVACAL 712 D F ++ VL +E + P D+ + +L+YN GGK NRGL+VV ++R L E + D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND LL + I R+LK + R++PYY+DL++LF + +QT GQ +DLIT +G DL ++ IV+YKTA+YSFYLPVA A+ Sbjct: 16 DFIQHFSQIVKVLTEEDIGHPEIG---DAITRLKEVLEYNAIGGKYNRGLTVVITFRELVEPGKQDPDSLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYQKPGIGLDAINDAFLLESSIYRLLKLYCREQPYYLDLIELFLQSSYQTEIGQTLDLITAPQGNVDLGRFTEKRYKSIVKYKTAFYSFYLPVAAAM 214
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_CHICK (Farnesyl pyrophosphate synthetase OS=Gallus gallus GN=FDPS PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41 Identity = 86/167 (51.50%), Postives = 113/167 (67.66%), Query Frame = 2 Query: 227 MLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSN-----HRRIVQYKTAYYSFYLPVACAL 712 +L YN PGGK NRGL+VV +YR L + + + A+GWCIE QA+FLV DDIMD S TRRGQ CW++ VG+ A ND LL + + R+LK + R +PYYV LL+LF + +QT GQM+DLIT + DLS+ ++ IV+YKTA+YSFYLPVA A+ Sbjct: 62 VLQYNAPGGKCNRGLTVVAAYRELSGPGQKDAESLRCALAVGWCIELFQAFFLVADDIMDQSLTRRGQLCWYKKEGVGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAYQTELGQMLDLITAPVSKVDLSHFSEERYKAIVKYKTAFYSFYLPVAAAM 228
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_MOUSE (Farnesyl pyrophosphate synthetase OS=Mus musculus GN=Fdps PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.171e-41 Identity = 87/197 (44.16%), Postives = 128/197 (64.97%), Query Frame = 2 Query: 137 FIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDL-----SNHRRIVQYKTAYYSFYLPVACAL 712 F ++ VL ++ L P D+ + +L+YN GGK NRGL+VV +++ L E K+ + + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P +G+ A ND +LL I R+LK + R++PYY++LL+LF + +QT GQ +DL+T +G DL ++ IV+YKTA+YSFYLP+A A+ Sbjct: 21 FSQIVKVLTEKELGHPEIG---DAIARLKEVLEYNALGGKYNRGLTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRRGQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAM 214
BLAST of FC876187 vs. ExPASy Swiss-Prot
Match: FPPS_HUMAN (Farnesyl pyrophosphate synthetase OS=Homo sapiens GN=FDPS PE=1 SV=4) HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41 Identity = 88/202 (43.56%), Postives = 128/202 (63.37%), Query Frame = 2 Query: 122 DLKSRFIEVYGVLKQELLNDPAFEFDHDSRQWVDRMLDYNVPGGKLNRGLSVVDSYRLLKEGKELTDDEFFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAANDGVLLRNHISRILKNHFRDKPYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDL-----SNHRRIVQYKTAYYSFYLPVACAL 712 D F ++ VL ++ + P D+ + +L+YN GGK NRGL+VV ++R L E ++ D + +GWC+E LQA+FLV DDIMD S TRRGQ CW++ P VG+ A ND LL I R+LK + R++PYY++L++LF + +QT GQ +DL+T +G DL ++ IV+YKTA+YSFYLP+A A+ Sbjct: 82 DFVQHFSQIVRVLTEDEMGHPEIG---DAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAM 280 The following BLAST results are available for this feature:
BLAST of FC876187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876187 ID=FC876187; Name=FC876187; organism=Citrus clementina; type=EST; length=717bpback to top |