FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.094e-60 Identity = 124/190 (65.26%), Postives = 134/190 (70.53%), Query Frame = 1 Query: 142 MASMVSTNCAQFSGLRRSSPT---------QSFSQHVNXXXXXXXXXXXXXXXX--VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 678 MA+ T FSGLRR SP QSF VN VVAMA S KFFVGGNWKCNGTK+SI KL+SDLN A LE FVYIDQVK+SLTDRI+I+ QNSWVGKGGAFTGEISVEQLKD+GCKWV+LGHSERRHVIGE D+FIGKKAAYALSEGLGVIACIGE+ Sbjct: 1 MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAMAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEK 190
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.893e-58 Identity = 115/168 (68.45%), Postives = 126/168 (75.00%), Query Frame = 1 Query: 175 FSGLRRSSPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 678 +SGLRRS P S VVAMA + KFFVGGNWKCNGTK+ I+KLVSDLN AKLE F+Y+DQVK+SLTDRIEI+ QNSWV KGGAFTGEISVEQLKDIG KWV+LGHSERRHVIGEDDQFIGKKAAYAL+EGLGVIACIGE+ Sbjct: 22 YSGLRRSCPKLDQSHSSLFQHLSLSSSSRKASRAVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQVKSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERRHVIGEDDQFIGKKAAYALNEGLGVIACIGEK 189
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 5.084e-58 Identity = 121/184 (65.76%), Postives = 135/184 (73.37%), Query Frame = 1 Query: 148 SMVSTNCAQFSGLRRS--------SPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S VST QFSGLRRS S SF Q+V+ VVAMA S KFFVGGNWKCNGTKESITKLVSDLN A LE FVYIDQVK+SLT R+EI+AQN W+GKGGAFTGEISVEQLKD+GC+WV+LGHSERRHVIGE ++FIGKKAAYAL++G+GVIACIGE Sbjct: 17 SAVST---QFSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSSSSRRCPRG-VVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYALNQGVGVIACIGE 196
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.261e-55 Identity = 102/133 (76.69%), Postives = 115/133 (86.47%), Query Frame = 1 Query: 277 VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 +VAMA S KFFVGGNWKCNGTKESI+KLVSDLN A LE F+YIDQVK+SLTDRIE++AQN+W+GKGGAFTGEIS EQL DIGC+WV+LGHSERRHVIGEDD+FIGKKAAYALS+ L V+ACIGE Sbjct: 40 LVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFIYIDQVKSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERRHVIGEDDEFIGKKAAYALSQNLKVMACIGE 172
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.330e-36 Identity = 70/127 (55.12%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 KFFVGGNWKCNGT+ES++K+V LN+ + +V++ L I++AAQN WV KGGAFTGE+S + L ++G WV+LGHSERR ++GE ++F+GKKAAYA SEGLGVIACIGE Sbjct: 4 KFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.032e-34 Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 286 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 678 MA S KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+ Sbjct: 1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEK 131
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.032e-34 Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 286 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 678 MA S KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+ Sbjct: 1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEK 131
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.032e-34 Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 286 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 678 MA S KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+ Sbjct: 1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEK 131
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_GORGO (Triosephosphate isomerase OS=Gorilla gorilla gorilla GN=TPI1 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.032e-34 Identity = 73/131 (55.73%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 286 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 678 MA S KFFVGGNWK NG K+S+ +L+ LN AK+ YID + L +I +AAQN + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+ Sbjct: 1 MAPSRKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTKVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEK 131
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPISB_DANRE (Triosephosphate isomerase B OS=Danio rerio GN=tpi1b PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.032e-34 Identity = 71/129 (55.04%), Postives = 87/129 (67.44%), Query Frame = 1 Query: 292 SSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 678 S KFFVGGNWK NG K+SI +L + LN AKL +Y+D ++ L I++AAQN + GAFTGEIS +KD G KWV+LGHSERRHV GE D+ IG+K A+AL GLGVIACIGE+ Sbjct: 2 SGRKFFVGGNWKMNGDKKSIEELANTLNSAKLNPDTEVVCGAPTIYLDYARSKLDPNIDVAAQNCYKVAKGAFTGEISPAMIKDCGVKWVILGHSERRHVFGESDELIGQKVAHALENGLGVIACIGEK 130 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |