FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_YERP3 (Triosephosphate isomerase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=tpiA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17 Identity = 49/124 (39.52%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG+ + +L++ L + +Y++Q K+ L RI + AQN V GAFTGE S E LKDIG +++++GHSERR E D+ I KK GL + CIGE Sbjct: 6 VMGNWKLNGSTHMVNELIAGLRKELSTVDGCGVAIAPPAIYLNQAKHELAGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHQESDELIAKKFGVLKEIGLIPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PHOLL (Triosephosphate isomerase OS=Photorhabdus luminescens subsp. laumondii GN=tpiA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17 Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG+ + +L++ L + +Y+ Q K +L RI + AQ+ V GAFTGE S LKDIG +++++GHSERR E D+FI KK A +GL + CIGE Sbjct: 6 VMGNWKLNGSTHMVNELITGLRQELSSVTGCDVAIAPPALYLSQAKQALAGSRIALGAQDVDVNLSGAFTGETSATMLKDIGAEYIIIGHSERRTYHQESDEFIAKKFAILKQQGLIPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17 Identity = 49/125 (39.20%), Postives = 65/125 (52.00%), Query Frame = 1 Query: 307 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXX-FVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 F+ GNWK + T LV +L A + F + V +L I +AAQN + GAFTGE+S LKD GC++V++GHSERR + E D FI +K + GL I CIGE Sbjct: 5 FIAGNWKLHKTSAEAAALVGELKGALSDVVDRDIVVAPVFTSLAAVIATLEKSDISVAAQNCYPENQGAFTGEVSPALLKDAGCRYVIVGHSERRQLFAESDAFINRKVKAVIDAGLSAILCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_ENT38 (Triosephosphate isomerase OS=Enterobacter sp. (strain 638) GN=tpiA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17 Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG++ + +L+++L + +Y+D K++ I + AQN V GAFTGE S E LKDIG K++++GHSERR E D+ I KK A +GL + CIGE Sbjct: 6 VMGNWKLNGSRHMVNELIANLRKELAGVTGCAVAIAPPDIYLDLAKHAADGSHIVLGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDELIAKKFAVLKEQGLIPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSE14 (Triosephosphate isomerase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=tpiA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.267e-16 Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWV-GKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +GT+ S+ +L+ L L ++ +QV L I + AQ++ + + GA TGEI+ QL D GCK V++GHSERR +IGE D + KK A + GL + CIGE Sbjct: 6 VAGNWKMHGTRASVAELIEGLGKQVLPGSVDIAVMPASLFTNQVIEGLRATSIIVGAQDAAIQAEQGALTGEIASSQLADAGCKLVLVGHSERRQLIGEQDDVLNKKFAAIQASGLTPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_ERWT9 (Triosephosphate isomerase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=tpiA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.267e-16 Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG K+ + +L++ L + +Y++Q K++++ + + AQN V GAFTGE+S + LKDIG +++++GHSERR E D I KK A GL + CIGE Sbjct: 6 VMGNWKLNGNKQMVNELIAGLRTELSGVDGCGVAIAPPVMYLEQAKHAISGSPVALGAQNVDVNLSGAFTGEVSADMLKDIGAQYIIIGHSERRTWHAESDDAIAKKFAVLKQTGLIPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPISL_HUMAN (Putative triosephosphate isomerase-like protein LOC286016 OS=Homo sapiens PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.267e-16 Identity = 51/131 (38.93%), Postives = 66/131 (50.38%), Query Frame = 1 Query: 286 MASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 678 MA S KFFVG NWK NG K+ + +L+ N A + Y + + L +I +A QN + GAFTGEIS +KD+G WVV K A+AL+E LGVIACIGE+ Sbjct: 1 MAPSRKFFVGRNWKMNGRKKCLGELIGTQNAATVPADTKVICALATAYNELARQKLAPKIAVAPQNCYKVTNGAFTGEISPGMVKDLGVTWVV-------------------KVAHALAERLGVIACIGEK 112
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_KLEPN (Triosephosphate isomerase OS=Klebsiella pneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.655e-16 Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG++ + +LV++L + +Y+D K + I + AQN V GAFTGE S E LKDIG +++++GHSERR E D+ I KK A +GL + CIGE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRTELAGVSGCAVAIAPPEMYLDLAKRAAEGSHIHLGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_HAES1 (Triosephosphate isomerase OS=Haemophilus somnus (strain 129Pt) GN=tpiA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.655e-16 Identity = 53/127 (41.73%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 310 VGGNWKCNG----TKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG TKE IT L +LN +Y+ + + +L I + QN + K GAFTG+IS E LKD G K+V++GHSERR E D+FI KK GL + CIGE Sbjct: 7 VMGNWKLNGSKAFTKELITGLKDELNAVS---GCDVAIAPPVMYLAEAETALVSSDIALGTQNVDLNKQGAFTGDISTEMLKDFGVKYVIIGHSERRQYHHESDEFIAKKFGVLKDAGLVPVLCIGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBB (Triosephosphate isomerase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=tpiA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.655e-16 Identity = 47/126 (37.30%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N T + K+V +L + FV +D VK + I++AAQN + GAFTGE++ L+ +G ++VVLGHSERR E D+ I KK A + + I C GE Sbjct: 3 KAIIAGNWKMNKTVDEAVKVVEELKPLVKDATCDVVVCPTFVCLDAVKKATAGSNIKVAAQNMHFEESGAFTGEVAPGMLEAMGIEYVVLGHSERREYFNETDEAINKKVKAAFAHNITPIVCCGE 128 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |