FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_SALDC (Triosephosphate isomerase OS=Salmonella dublin (strain CT_02021853) GN=tpiA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.822e-16 Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG++ + +LV++L + +YID K + I + AQN + GAFTGE S E LKDIG +++++GHSERR E D+ I KK A +GL + CIGE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRKELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_SALCH (Triosephosphate isomerase OS=Salmonella choleraesuis GN=tpiA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.822e-16 Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG++ + +LV++L + +YID K + I + AQN + GAFTGE S E LKDIG +++++GHSERR E D+ I KK A +GL + CIGE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_SALA4 (Triosephosphate isomerase OS=Salmonella agona (strain SL483) GN=tpiA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.822e-16 Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG++ + +LV++L + +YID K + I + AQN + GAFTGE S E LKDIG +++++GHSERR E D+ I KK A +GL + CIGE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRKELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_HAES2 (Triosephosphate isomerase OS=Haemophilus somnus (strain 2336) GN=tpiA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.822e-16 Identity = 53/127 (41.73%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 310 VGGNWKCNG----TKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG TKE IT L +LN +Y+ + + +L I + QN + K GAFTG+IS E LKD G K+V++GHSERR E D+FI KK GL + CIGE Sbjct: 7 VMGNWKLNGSKAFTKELITGLKDELNAVS---GCDVAIAPPVMYLAEAEAALVSSDIALGTQNVDLNKQGAFTGDISTEMLKDFGVKYVIIGHSERRQYHHESDEFIAKKFGVLKDAGLVPVLCIGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSEU2 (Triosephosphate isomerase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=tpiA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16 Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWV-GKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +GT+ S+ +L+ L L ++ QV + L I + AQ++ + + GA TGE++ QL D GCK V++GHSERR +IGE D + KK A ++GL + C+GE Sbjct: 6 VAGNWKMHGTRASVAELIEGLCKQSLPGSVDIAVMPASLFTCQVVDGLKATSIIVGAQDAAIQAEQGALTGEVASSQLADAGCKLVLVGHSERRQLIGEQDDVLNKKFAAIQAKGLTPVLCVGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MYCMS (Triosephosphate isomerase OS=Mycoplasma mycoides subsp. mycoides SC GN=tpiA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16 Identity = 47/125 (37.60%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK NGT ES+T ++ + D K++ + Q L ++IAAQN GA+TGEIS LK++G ++V++GHSERR + E D + KKA L + I C GE Sbjct: 3 KKVIFGNWKMNGTNESLTDFLNQV-DNKIDSSKIIAGLAVPYVMLQTGLKLAKNVKIAAQNVHYKDKGAYTGEISTTMLKEVGVEYVIIGHSERREMFNETDLDVNKKAKVLLENNITPIICCGE 126
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_ALKMQ (Triosephosphate isomerase OS=Alkaliphilus metalliredigens (strain QYMF) GN=tpiA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16 Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N T + ++++ D F + + K +L +I++ AQN GAFTGEIS E LK++G ++++GHSERR E D+ + KK AL + L I C+GE Sbjct: 3 KPIIAGNWKMNKTVAETLQFINEIRDQAETTDVEVVLCCPFTALSEAKKALGASKIKLGAQNMHWEDNGAFTGEISAEMLKELGVDYILIGHSERRQYFNETDETVNKKIKKALEQKLMPILCVGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_WOLTR (Triosephosphate isomerase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=tpiA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 48/124 (38.71%), Postives = 62/124 (50.00%), Query Frame = 1 Query: 304 FFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 F + NWK NGT+ + LND E F + L I I AQN K G++TGEIS E LK++GC +V+LGHSER H E + I K+ A+ GL I C+GE Sbjct: 3 FLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLPG-NIELNSNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTH---ETNGEIKLKSETAIESGLHPIICVGE 122
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_FRATN (Triosephosphate isomerase OS=Francisella tularensis subsp. novicida (strain U112) GN=tpiA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 316 GNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 GNWK NG SI +L S ++ A+ + VY+ +V + L +++ + QN GA+TGEIS L+DIGC ++++GHSERR + E D+ + KK + + + CIGE Sbjct: 7 GNWKMNGNSTSIKELCSGISQAQYDTSRVAIAVFPSSVYVKEVISQLPEKVGVGLQNITFYDDGAYTGEISARMLEDIGCDYLLIGHSERRSLFAESDEDVFKKLNKIIDTTITPVVCIGE 127
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_CLOB8 (Triosephosphate isomerase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=tpiA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 46/126 (36.51%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N T + K+V +L + FV +D VK ++ I++AAQN + GAFTGE++ L+ +G +VVLGHSERR E D+ + KK A + I C GE Sbjct: 3 KAIIAGNWKMNKTIDEAVKMVEELKPLVKDATCDVVVCPTFVCLDAVKKAVAGSNIKVAAQNMHFEESGAFTGEVAPGMLEAMGIDYVVLGHSERREYFNETDEALNKKVKKAFEHNITPILCCGE 128 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |