FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PARD8 (Triosephosphate isomerase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=tpiA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 45/128 (35.16%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K V GNWK N T L L++A F ++ V ++ T++I +AA+N + GA+TGE+S + G K+V+LGHSERR E + + K AL+ GL I CIGE Sbjct: 3 KNIVAGNWKMNTTLAEGLALAKGLDEALKGKTPNCDVIIGTPFTHLASVAAAIDTNKIGVAAENCADKEKGAYTGEVSAAMVASTGAKYVILGHSERRAYYHETPEILKTKVELALANGLTPIFCIGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_HALHL (Triosephosphate isomerase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=tpiA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 37/122 (30.33%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK NG ++ + ++ D+ + + + + L + + AQ+ GA+TGE+S L + GC++V++GHSERR + GED+ + K A + GL I C+GE Sbjct: 6 IAGNWKMNGDQDLVRRVAERAADSAGDAELAVCPP--YPLLAAAASQLPFGVALGAQDVSEYDSGAYTGEVSASMLLEAGCRYVIVGHSERRTLYGEDNGRVAGKFVAARNAGLTPILCVGE 125
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_CUPTR (Triosephosphate isomerase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=tpiA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 40/121 (33.06%), Postives = 60/121 (49.59%), Query Frame = 1 Query: 316 GNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 GNWK +G+ + L+ + F Y+ Q + L ++ AQ+ GAFTGE++ L + GC +V++GHSERR GE DQ + KA AL G+ + C+GE Sbjct: 8 GNWKMHGSLAANAALLEGIQAGAGVARATLAVCAPFPYLAQCQALLNGSKVAWGAQDVSAEARGAFTGEVAASMLGEFGCTYVLVGHSERRTYHGETDQAVAAKALRALEFGIVPVVCVGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_XANP2 (Triosephosphate isomerase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=tpiA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 46/137 (33.58%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 286 MASSNKFFVGGNWKCNGTKESITKLVS-------DLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 M +S + + GNWK NG K S+ ++ + DL AKL+ +++ S +++ QN GA TG IS E LKD G V++GHSERR + E D + K A GL I C+GE Sbjct: 1 MPASRRVLIAGNWKMNGLKSSLAEIEALAAGYDGDLK-AKLDLLVCPPATLLISAAERLAGS---GVQLGGQNCHPAPAGAHTGGISAEMLKDAGVTSVIVGHSERRTNLSESDAVVMAKVKAAWCFGLLPIVCVGE 133
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_TRIEI (Triosephosphate isomerase OS=Trichodesmium erythraeum (strain IMS101) GN=tpiA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 47/130 (36.15%), Postives = 62/130 (47.69%), Query Frame = 1 Query: 301 KFFVGGNWKCNGT----KESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK T KE + L+S L K F +D + L I + AQN GA+TGEIS LKD+G +V++GHSERR GE D+ + + A GL I C+GE Sbjct: 3 KTIIAGNWKMYKTQLEAKEFLEGLMSQLT--KTPEEREVVLCTPFTALDFMSKILHGSLIRLGAQNVHWEDEGAYTGEISGLMLKDVGVSYVIVGHSERRQYFGETDETVNMRLKAAQKHGLTPILCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_STRPF (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=tpiA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 47/130 (36.15%), Postives = 64/130 (49.23%), Query Frame = 1 Query: 301 KFFVGGNWKCNGT----KESITKLVSDLNDAKLEXXXXXXXXXXFVY-IDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N K + + S L L V I+ K+S+ +++AAQN + GAFTGE S + L ++G +VV+GHSERR E D+ I KKA + GL I C GE Sbjct: 4 KPIIAGNWKMNKNPQEAKAFVEAVASKLPSTDLVDVAVAAPAVDLVTTIEAAKDSV---LKVAAQNCYFENTGAFTGETSPKVLAEMGADYVVIGHSERRDYFHETDEDINKKAKAIFANGLTPIVCCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MYCA9 (Triosephosphate isomerase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=tpiA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 51/134 (38.06%), Postives = 64/134 (47.76%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTKESITKLVSDLNDA---KLEXXXXXXXXXXFVYIDQVKNSLTD----RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N LV + + K F I V+ +L D R+ AQ+ V GA+TGE+S L +G +VV+GHSERR GEDD + KAA AL GL I CIGE Sbjct: 2 SRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDIRSVQ-TLVDGDKLRLTYGAQDLSVYDSGAYTGEVSGAFLAKLGVTYVVVGHSERRQYHGEDDALVAAKAAAALKHGLTPIVCIGE 134
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS1_LISMO (Triosephosphate isomerase 1 OS=Listeria monocytogenes GN=tpiA1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 42/127 (33.07%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDL-NDAKLEXXXXXXXXXXFVYIDQ-VKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N T + D+ N+ +++ + V+ + + ++AQN + GAFTGEIS L D+G +V++GHSERR E D+ I KKA G+ I C GE Sbjct: 3 KPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTDLRVSAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_THEEB (Triosephosphate isomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 40/125 (32.00%), Postives = 63/125 (50.40%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVY--IDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK + T++ + + ++ Y + + SL R+++ AQN GAFTGEIS L ++G ++V++GHSERR GE D + ++ A S GL I C+GE Sbjct: 28 LAGNWKMHKTQQEAVAFLQEFLGELVDTPSDREVVLCVPYTCLSVLSKSLHGTRVKLGAQNVHWADQGAFTGEISPPMLVELGVRYVIIGHSERRQYFGETDATVNQRLRAAQSHGLTPILCVGE 152
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_RALSO (Triosephosphate isomerase OS=Ralstonia solanacearum GN=tpiA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 1 Query: 292 SSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S+ V GNWK +G+ +L+ + A + F Y+ Q ++ L + AQ+ GAFTGE++ L + GC + ++GHSERR GE D + KA AL G+ I C+GE Sbjct: 2 SARPKLVVGNWKLHGSLNGNAELLEKIKAAG-QTRAALAVCAPFPYLAQCQSVLAGSSVAWGAQDVSAETRGAFTGEVAASMLSEFGCGYAIVGHSERRTYHGETDAQVAIKALRALEHGITPIVCVGE 129 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |