FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LACDL (Triosephosphate isomerase OS=Lactobacillus delbrueckii subsp. lactis GN=tpiA PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 41/127 (32.28%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLND-----AKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK N + + V+ + D +K+E + + S + + A+N + GAFTGE S LK++G ++V++GHSERR E D+ I KKA + GL I C GE Sbjct: 7 IAGNWKLNMNPKETVEFVNAVKDQLPDPSKVESVICAPAVDLDALLKAAEGS---NLHVGAENCYWENSGAFTGETSPAVLKEMGVQYVIIGHSERRDYFHETDEDINKKAKAIFANGLTPILCCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LACDE (Triosephosphate isomerase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=tpiA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 41/127 (32.28%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLND-----AKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK N + + V+ + D +K+E + + S + + A+N + GAFTGE S LK++G ++V++GHSERR E D+ I KKA + GL I C GE Sbjct: 7 IAGNWKLNMNPKETVEFVNAVKDQLPDPSKVESVICAPAVDLDALLKAAEGS---NLHVGAENCYWENSGAFTGETSPAVLKEMGVQYVIIGHSERRDYFHETDEDINKKAKAIFANGLTPILCCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LACDB (Triosephosphate isomerase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=tpiA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 41/127 (32.28%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLND-----AKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK N + + V+ + D +K+E + + S + + A+N + GAFTGE S LK++G ++V++GHSERR E D+ I KKA + GL I C GE Sbjct: 7 IAGNWKLNMNPKETVEFVNAVKDQLPDPSKVESVICAPAVDLDALLKAAEGS---NLHVGAENCYWENSGAFTGETSPAVLKEMGVQYVIIGHSERRDYFHETDEDINKKAKAIFANGLTPILCCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LACDA (Triosephosphate isomerase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=tpiA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 41/127 (32.28%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLND-----AKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK N + + V+ + D +K+E + + S + + A+N + GAFTGE S LK++G ++V++GHSERR E D+ I KKA + GL I C GE Sbjct: 7 IAGNWKLNMNPKETVEFVNAVKDQLPDPSKVESVICAPAVDLDALLKAAEGS---NLHVGAENCYWENSGAFTGETSPAVLKEMGVQYVIIGHSERRDYFHETDEDINKKAKAIFANGLTPILCCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSYCK (Triosephosphate isomerase OS=Psychrobacter cryohalolentis (strain K5) GN=tpiA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 46/140 (32.86%), Postives = 66/140 (47.14%), Query Frame = 1 Query: 307 FVGGNWKCN-GTKESITKLVSDL-------------NDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKG---GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 +V GNWK N T + L+ DL N A+ + F+++ V L D + A G GA+TG+ S +Q+ D G W +LGHSERR E + + +K +ALS+ LGV+ CIGE Sbjct: 4 WVIGNWKQNPATSHDVNALLDDLCAAISTTKQMSHDNSARCQIMVAPS----FIHLAAVNGRLKDTSILCAAQDVSGHSASVGAYTGDCSAQQIVDAGATWTILGHSERRQYHQESNDTLLQKMIHALSQDLGVVFCIGE 139
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PROM5 (Triosephosphate isomerase OS=Prochlorococcus marinus (strain MIT 9515) GN=tpiA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 49/133 (36.84%), Postives = 64/133 (48.12%), Query Frame = 1 Query: 301 KFFVGGNWK----CNGTK---ESITKLVSDL-NDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK C TK E L+ DL ND K+ F S D ++IA+QN GAFT EIS + L + K+ ++GHSE R E D+ I K+A +A S GL I C+GE Sbjct: 3 KSVIAGNWKMHMTCAETKNYLEEFIPLIKDLPNDRKIVIAPPFTAISTFS-----SYSNFDYLDIASQNIHWEDQGAFTAEISPKMLIEHNVKYAIVGHSEPRKYFSESDEQINKRAVFAQSSGLTPIVCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_NITEC (Triosephosphate isomerase OS=Nitrosomonas eutropha (strain C91) GN=tpiA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 307 FVGGNWKCNGT----KESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 FV GNWK G +E + +V + + + Y+ Q ++ L + QN GA+TGE+S L D GC++V++GHSERR + GED+Q + +K A + L I C+GE Sbjct: 6 FVAGNWKMYGNLVQNQELLAAIVLGIPSLQ---NASCAVCVPYPYLAQAQSVLKGTHVAWGGQNISQHHQGAYTGEVSAGMLTDFGCRYVIVGHSERRTLYGEDNQMVAEKFHSAQEQSLVPILCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_GEOBB (Triosephosphate isomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=tpiA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 45/130 (34.62%), Postives = 64/130 (49.23%), Query Frame = 1 Query: 310 VGGNWKCNGTK-------ESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK TK E + LVS ++ ++ F + + +L I +AAQ+ + + GAFTGE+S L D G V++GHSERR GE ++ + KK AL L I CIGE Sbjct: 6 IAGNWKLFKTKNEALALIEELAPLVSGVDSVEI------VVAPVFTVLPTLPAALAGTGISLAAQDVFWEEEGAFTGEVSPRMLLDAGASHVIIGHSERRQYFGETEETVNKKVKAALKGALVPIVCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS2_BRUSU (Triosephosphate isomerase 2 OS=Brucella suis GN=tpiA2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 46/128 (35.94%), Postives = 61/128 (47.66%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLN--DAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 KF++G +WK N T L DA F + +VK L+ +++ AQN GA+TGEIS LKD V LGHSERR GE ++ +G K A+ GL + CIGE Sbjct: 3 KFWIGTSWKMNKTLAEARLFAEALKAADAGRSPDIQRFVIPPFTAVREVKEILSGTSVKVGAQNMHWADQGAWTGEISPLMLKDCNLDIVELGHSERREHFGETNETVGLKVEAAVRHGLIPLICIGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS2_BRUAB (Triosephosphate isomerase 2 OS=Brucella abortus GN=tpiA2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 46/128 (35.94%), Postives = 61/128 (47.66%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLN--DAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 KF++G +WK N T L DA F + +VK L+ +++ AQN GA+TGEIS LKD V LGHSERR GE ++ +G K A+ GL + CIGE Sbjct: 3 KFWIGTSWKMNKTLAEARLFAEALKAADAGRSPDIQRFVIPPFTAVREVKEILSGTSVKVGAQNMHWADQGAWTGEISPLMLKDCNLDIVELGHSERREHFGETNETVGLKVEAAVRHGLIPLICIGE 130 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |