FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_XYLFA (Triosephosphate isomerase OS=Xylella fastidiosa GN=tpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 40/123 (32.52%), Postives = 60/123 (48.78%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYI-DQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +G+ LV+ + +Y+ D + + + AQN GA+TGE+S + D+G + ++GHSERR ED + + +K A ALS GL I C+GE Sbjct: 6 VAGNWKLHGSHAFAQALVAQVAAGLPLLGVSVIILPPLLYLSDLAQRFKGEGLAFGAQNVSHHDKGAYTGEVSAAMVADVGAHYTLVGHSERREYHHEDSELVARKFAAALSAGLRPILCVGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_XYLF2 (Triosephosphate isomerase OS=Xylella fastidiosa (strain M23) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 40/123 (32.52%), Postives = 60/123 (48.78%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYI-DQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +G+ LV+ + +Y+ D + + + AQN GA+TGE+S + D+G + ++GHSERR ED + + +K A ALS GL I C+GE Sbjct: 6 VAGNWKLHGSHAFAQALVAQVAAGLPLPGVSVIILPPLLYLSDLAQRFKGEGLAFGAQNVSHHDKGAYTGEVSAAMVADVGAHYTLVGHSERREYHHEDSELVARKFAAALSAGLRPILCVGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHR (Triosephosphate isomerase OS=Mycoplasma hyorhinis GN=tpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 40/131 (30.53%), Postives = 59/131 (45.04%), Query Frame = 1 Query: 298 NKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSL-----TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 +K + GNWK N T + S N +E F N T ++E+A QN + GA+TGEIS + L D+ K+ ++GHSERR E D + K A+ + + C+GE Sbjct: 2 SKTIIIGNWKMNKTFTQTKEFFSAFNQLYIENKNKINQNLDFAVALPAINVAAFSKNTTKLELAVQNMSQFEKGAYTGEISAQMLLDLNVKYAIIGHSERRQYFKETDLDVNAKTQQAIKNNIIPVVCVGE 132
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MYCFL (Triosephosphate isomerase OS=Mycoplasma flocculare GN=tpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 40/131 (30.53%), Postives = 61/131 (46.56%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDL------NDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N T + N K++ F + + S D++++AAQN GAFTGEIS + L+D+ +V++GHSERR + E + + K A L + C+GE Sbjct: 2 KKIIIGNWKMNKTVHETRDFIQKFDIFYSKNLGKIKDNLDFAIAPSFTSLALISTSKIDKLKVAAQNLSQFDSGAFTGEISAKMLQDLAVHYVIIGHSERREIFKEIGEDLTNKILQAQKYNLIPVFCVGE 132
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBL (Triosephosphate isomerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 43/129 (33.33%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF---VYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N +++ L + + K+ F +++ V L I + AQN + AFTGE S EQLK++G K V++GHSERR +GE + F +K + L V+ C+GE Sbjct: 3 KTVIAGNWKMNLSEKEALSLAHSIKE-KIPAISKGRISMIFPSTLHLAGVAKILQGTEILVGAQNVYPSGLAAFTGETSPEQLKELGVKVVMIGHSERRQFLGETNSFCNEKIHFLLKNDFIVLYCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LEPBJ (Triosephosphate isomerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 43/129 (33.33%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF---VYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N +++ L + + K+ F +++ V L I + AQN + AFTGE S EQLK++G K V++GHSERR +GE + F +K + L V+ C+GE Sbjct: 3 KTVIAGNWKMNLSEKEALSLAHSIKE-KIPAISKGRISMIFPSTLHLAGVAKILQGTEILVGAQNVYPSGLAAFTGETSPEQLKELGVKVVMIGHSERRQFLGETNSFCNEKIHFLLKNDFIVLYCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_DICTD (Triosephosphate isomerase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 1 Query: 310 VGGNWKCNGT---KESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR--IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQ 678 + NWK T ES K +L+ E +Y V N L + I++ AQN + K GA+TGEIS LKD+ C +V++GHSERR E + I KK A L I C+GE+ Sbjct: 6 IAANWKMYKTCAETESFIKEFKELSKGYEEKEIVICPPFTSLY---VANKLLEDTPIKLGAQNMFWEKEGAYTGEISPIMLKDLNCSYVIIGHSERRQYFSETNDMINKKLKSAFEYELIPIFCVGEK 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_BUCBP (Triosephosphate isomerase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=tpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 43/130 (33.08%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDA----KLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + NWK NG + + L+ L + K + +VY+ +K+ ++ I + +QN + GAFTGE+S+ LKD+G +V++GHSERR E+D I KK L + CIGE Sbjct: 3 KKIIIANWKLNGNIQLLQTLLKPLVNFYIRHKNKSSIKLVIMPPYVYLYPMKSIISHSSILLGSQNVDINLIGAFTGEVSINMLKDVGVSYVLVGHSERRQYHRENDVIIAKKFKIVKDSHLIPVLCIGE 132
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_AYWBP (Triosephosphate isomerase OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 38/123 (30.89%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK + K+ + + ++ + +D + +++ AQN + GAFTGE+S + L +G K V+LGHSERR + GE DQ + K AL L C+GE Sbjct: 10 IAGNWKMHKCKDEALEFIQKVSLQVPDQTQVQTLIFPQLTLLDPLVQLQGANLQVGAQNMFYETEGAFTGEVSPQNLLSLGVKHVLLGHSERRTLFGETDQTVNLKLLSALKHKLVPTVCVGE 132
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_XANOP (Triosephosphate isomerase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 38/123 (30.89%), Postives = 62/123 (50.41%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYI-DQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +G++ T+LV+ L Y+ D +++ + AQ+ + GA+TGE+S L D+G + ++GHSERR E + + +K A A+ GL + C+GE Sbjct: 6 VAGNWKLHGSRAFATELVAKLAAHMPLEGIDVVILPPLPYLGDLIEDFEAHHLSFGAQDVSSNEKGAYTGEVSASMLVDVGAGYGLVGHSERRQYHQESSELVARKFAAAIHAGLTPVLCVGE 128 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |