FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_XANOM (Triosephosphate isomerase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 38/123 (30.89%), Postives = 62/123 (50.41%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYI-DQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +G++ T+LV+ L Y+ D +++ + AQ+ + GA+TGE+S L D+G + ++GHSERR E + + +K A A+ GL + C+GE Sbjct: 6 VAGNWKLHGSRAFATELVAKLAAHMPLEGIDVVILPPLPYLGDLIEDFEAHHLSFGAQDVSSNEKGAYTGEVSASMLVDVGAGYGLVGHSERRQYHQESSELVARKFAAAIHAGLTPVLCVGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_SYNP2 (Triosephosphate isomerase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 43/134 (32.09%), Postives = 64/134 (47.76%), Query Frame = 1 Query: 301 KFFVGGNWKCNGT--------KESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK T K + K+ D + ++ F + + SL R+ + AQN GAFTGEIS L ++G ++V++GHSERR GE D+ + ++ A GL I C+GE Sbjct: 3 KIIIAGNWKMYKTQAESLDFLKALLPKIADDHEEREV------VLCTPFTDLGLMSKSLHGTRVRLGAQNIHWADEGAFTGEISGSMLTEMGVRYVIVGHSERRQYFGETDETVNQRLKAAQRHGLTPILCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_STRSY (Triosephosphate isomerase OS=Streptococcus suis (strain 05ZYH33) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 45/132 (34.09%), Postives = 61/132 (46.21%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTKESITKLVSDLNDA-----KLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N + V + K+E + K+S +++AAQN + GAFTGE S + L ++G +VV+GHSERR E D+ I KKA GL I C GE Sbjct: 2 SRKPIIAGNWKMNKNPQEAQAFVEAIAGKLPAGDKIEAAIAAPAVDLNALLWFAKDS---ELKVAAQNCYFEDAGAFTGETSPKVLAEMGVNYVVIGHSERRDYFHETDEDINKKAHAIFRNGLTPIICCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_STRS2 (Triosephosphate isomerase OS=Streptococcus suis (strain 98HAH33) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 45/132 (34.09%), Postives = 61/132 (46.21%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTKESITKLVSDLNDA-----KLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N + V + K+E + K+S +++AAQN + GAFTGE S + L ++G +VV+GHSERR E D+ I KKA GL I C GE Sbjct: 2 SRKPIIAGNWKMNKNPQEAQAFVEAIAGKLPAGDKIEAAIAAPAVDLNALLWFAKDS---ELKVAAQNCYFEDAGAFTGETSPKVLAEMGVNYVVIGHSERRDYFHETDEDINKKAHAIFRNGLTPIICCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_RALEH (Triosephosphate isomerase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 40/121 (33.06%), Postives = 61/121 (50.41%), Query Frame = 1 Query: 316 GNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 GNWK +G+ + L+ + + F Y+ Q + L ++ AQ+ GAFTGE+S + + GC +V++GHSERR GE DQ + KA AL G+ + C+GE Sbjct: 8 GNWKMHGSLAANAALLEGIKAGAAKATLAVCAP--FPYLAQCQALLNGSQVAWGAQDVSAEARGAFTGEVSASMVGEFGCTYVLVGHSERRTYHGETDQTVAAKALRALEFGIVPVVCVGE 126
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSYA2 (Triosephosphate isomerase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 1 Query: 307 FVGGNWKCNG--------------TKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQ---NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 +V GNWK N T S TK +S N + + F+++ V + L D + A +++ GA+TG+ S +Q+ D+G W +LGHSERR E + + +K +AL++ LGV+ CIGE Sbjct: 4 WVIGNWKQNPATSHDVDALLNELCTAISTTKQLSHNNSTRCQIMVAPS----FLHLAAVSSRLKDTSVLCAAQDVSAYSASVGAYTGDCSAQQIADVGATWTILGHSERRQYHQESNDTLLQKMTHALTQELGVVFCIGE 139
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PROAC (Triosephosphate isomerase OS=Propionibacterium acnes GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 45/131 (34.35%), Postives = 63/131 (48.09%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-------DRIEIA--AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK N + T LV DL +A L+ V I + D++ IA AQ+ GA+TGE+S L +GC++VV+GHSERR E D+ + KA + G+ I C GE Sbjct: 7 MAGNWKMNLDHVAATSLVQDLGEA-LKAAGYDSSKSEAVVIPPFTDIRPVAIIIDGDKLPIAYGAQDISAHDDGAYTGEVSGAMLSKLGCRYVVVGHSERREYHNESDELVNAKAKKVIENGMTPIICCGE 136
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_ONYPE (Triosephosphate isomerase OS=Onion yellows phytoplasma GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 38/123 (30.89%), Postives = 57/123 (46.34%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK K+ + + ++ + +D + +++ AQN + GAFTGE+S + L +G K V+LGHSERR GE DQ + K AL L C+GE Sbjct: 10 IAGNWKMYKCKDEALEFIQKVSLQVPDQTQVQTLIFPQLTLLDSLAQLQGTNLQVGAQNMFYESEGAFTGEVSPQNLLSLGVKHVLLGHSERRTFFGETDQTVNLKLLSALKHKLVPTVCVGE 132
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MYCTU (Triosephosphate isomerase OS=Mycobacterium tuberculosis GN=tpiA PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 48/134 (35.82%), Postives = 63/134 (47.01%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTKESITKLVSDLNDA---KLEXXXXXXXXXXFVYIDQVKNSLTD----RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N LV + + K F + V+ +L D R+ AQ+ GA+TG++S L +GC +VV+GHSERR EDD + KAA AL GL I CIGE Sbjct: 2 SRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQ-TLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGE 134
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MYCTA (Triosephosphate isomerase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 48/134 (35.82%), Postives = 63/134 (47.01%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTKESITKLVSDLNDA---KLEXXXXXXXXXXFVYIDQVKNSLTD----RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N LV + + K F + V+ +L D R+ AQ+ GA+TG++S L +GC +VV+GHSERR EDD + KAA AL GL I CIGE Sbjct: 2 SRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQ-TLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGE 134 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |