FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MYCBP (Triosephosphate isomerase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 48/134 (35.82%), Postives = 63/134 (47.01%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTKESITKLVSDLNDA---KLEXXXXXXXXXXFVYIDQVKNSLTD----RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N LV + + K F + V+ +L D R+ AQ+ GA+TG++S L +GC +VV+GHSERR EDD + KAA AL GL I CIGE Sbjct: 2 SRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQ-TLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGE 134
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MYCBO (Triosephosphate isomerase OS=Mycobacterium bovis GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 48/134 (35.82%), Postives = 63/134 (47.01%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTKESITKLVSDLNDA---KLEXXXXXXXXXXFVYIDQVKNSLTD----RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N LV + + K F + V+ +L D R+ AQ+ GA+TG++S L +GC +VV+GHSERR EDD + KAA AL GL I CIGE Sbjct: 2 SRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQ-TLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGE 134
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MORSP (Triosephosphate isomerase OS=Moraxella sp. GN=tpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 46/140 (32.86%), Postives = 65/140 (46.43%), Query Frame = 1 Query: 307 FVGGNWKCN-GTKESITKLVSDL-------------NDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKG---GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 +V GNWK N T + L+ DL N A+ + +++ V L D + A G GA+TGE S +Q+ D G W +LGHSERR E + + +K +ALS+ LGV+ CIGE Sbjct: 4 WVIGNWKQNPATSHDVNALLDDLCAAISTTKQMSHDNSARCQIMVAPS----LIHLAAVNGRLKDTSILCAAQDVSGHSASVGAYTGECSAQQIVDAGATWTILGHSERRQYHQESNDALLQKMIHALSQDLGVVFCIGE 139
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS1_RHILO (Triosephosphate isomerase 1 OS=Rhizobium loti GN=tpiA1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 45/125 (36.00%), Postives = 59/125 (47.20%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLND--AKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NGT S+ +L N + L+ + L+ + ++ + GA+TG IS E LKD G V++GHSE R GEDD + KAA A GL I CIGE Sbjct: 9 VAGNWKMNGTSASLNELRMIGNGFMSGLDAETEALVCVPATLLSHAAEILSRTPVHAGGEDCHTKESGAYTGCISAEMLKDAGASHVIVGHSECREQRGEDDATVQAKAAAAWRAGLVAIICIGE 133
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LEPIN (Triosephosphate isomerase OS=Leptospira interrogans GN=tpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 40/128 (31.25%), Postives = 62/128 (48.44%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDA--KLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N + + L + + + ++++ V L + + AQN + AFTGE S +QLK+IG K V++GHSERR +GE + F K + L V+ C+GE Sbjct: 3 KTIIAGNWKMNLSLKEAVFLAHSIREKIPSISKDKVSMVFPSTLHLENVSKILEGSSVIVGAQNCYHSGLAAFTGETSPDQLKEIGVKVVMVGHSERRQFLGESNFFCNDKIRFLLKNEFTVLYCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LEPIC (Triosephosphate isomerase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=tpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 40/128 (31.25%), Postives = 62/128 (48.44%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDA--KLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N + + L + + + ++++ V L + + AQN + AFTGE S +QLK+IG K V++GHSERR +GE + F K + L V+ C+GE Sbjct: 3 KTIIAGNWKMNLSLKEAVFLAHSIREKIPSISKDKVSMVFPSTLHLENVSKILEGSSVIVGAQNCYHSGLAAFTGETSPDQLKEIGVKVVMVGHSERRQFLGESNFFCNDKIRFLLKNEFTVLYCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_DEIGD (Triosephosphate isomerase OS=Deinococcus geothermalis (strain DSM 11300) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 38/119 (31.93%), Postives = 56/119 (47.06%), Query Frame = 1 Query: 319 NWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 NWK N T +DL+ A + + + +L + + Q+ GA+TGEIS L+D+G +V++GHSERR E D + KA A + GL I C+GE Sbjct: 9 NWKMNKTPSEARAWAADLSSALTPGNAELAVLAPAIDLPVLAGALPAGVALGGQDVSRFAAGAYTGEISAAMLRDVGATYVIVGHSERRTYHAETDAVVAAKARQAQAAGLIPIVCVGE 127
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_CYAP7 (Triosephosphate isomerase OS=Cyanothece sp. (strain PCC 7424) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 41/128 (32.03%), Postives = 59/128 (46.09%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYID---QVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK T+ + V + + D KN RI++ AQN + GA+TGEIS L +IG +V++GHSERR G+ D+ + + A GL I C+GE Sbjct: 3 KIIIAGNWKMYKTQAEALEFVQVFKSKIEDTDESREIVLCAPFTDLGAMSKNLHGSRIKLGAQNVHWEEAGAYTGEISGAMLTEIGVSYVIVGHSERRQYFGDTDETVNLRVLAAQKYGLIPILCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_BRASO (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain ORS278) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 42/127 (33.07%), Postives = 59/127 (46.46%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDA-----KLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK NG K S + + L A K + + ++ + + + AQ+ GA TG+IS E L D G V++GHSERR GE D + +KA A GL I C+GE Sbjct: 9 IAGNWKMNGLKASAAEFEAMLAGAAEVTGKADLLVCPPATLLAAFAEKTRGGKA--VAVGAQDCHAKASGAHTGDISAEMLADAGASAVIVGHSERRADHGESDVVVHQKAEAAWRAGLVAIVCVGE 133
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_BARBK (Triosephosphate isomerase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 44/133 (33.08%), Postives = 63/133 (47.37%), Query Frame = 1 Query: 286 MASSNKFFVGGNWKCNGTKESITKL--VSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 M SS + + GNWK NGT ES+ +L ++ D+ + + + + L+D I + Q+ G TG+IS LK+ G V+LGHSERR E D + K A GL + CIGE Sbjct: 1 MTSSIRPLLAGNWKMNGTSESLRELRAIASGIDSDRDRCFEALVCVPATLLSRASDILSDENIFLGGQDCHFNDSGPHTGDISACMLKEAGASHVILGHSERRTDYRESDAIVCAKVKAAWRAGLVALICIGE 133 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |