FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS2_RHIME (Triosephosphate isomerase 2 OS=Rhizobium meliloti GN=tpiA2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 48/132 (36.36%), Postives = 62/132 (46.97%), Query Frame = 1 Query: 292 SSNKFFVGGNWKCNGTKESITKLVSDL---NDAKLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S + +VG +WK N T L +DA+ + F QVK L +++ AQN GA+TGEIS L D V LGHSERR GE D+ +G K A A+ GL + CIGE Sbjct: 2 SKSGLWVGTSWKMNKTLAEAMVFADGLAAADDAR-DQRIQRFVIPPFTAARQVKERLKATSVKVGAQNMHWDDAGAWTGEISPVMLSDCDLDIVELGHSERREHFGETDRTVGLKTAAAVKHGLVPLICIGE 132
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS2_BRUME (Triosephosphate isomerase 2 OS=Brucella melitensis GN=tpiA2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 45/128 (35.16%), Postives = 60/128 (46.88%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLN--DAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 KF++G +WK N T L DA F + +VK L+ +++ AQN G +TGEIS LKD V LGHSERR GE ++ +G K A+ GL + CIGE Sbjct: 3 KFWIGTSWKMNKTLAEARLFAEALKAADAGRSPDIQRFVIPPFTAVREVKEILSGTSVKVGAQNMHWADQGTWTGEISPLMLKDCNLDIVELGHSERREHFGETNETVGLKVEAAVRHGLIPLICIGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_XYLFM (Triosephosphate isomerase OS=Xylella fastidiosa (strain M12) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 40/123 (32.52%), Postives = 60/123 (48.78%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYI-DQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +G+ LV+ + +Y+ D + + + AQN GA+TGE+S + D+G + ++GHSERR ED + + +K A ALS GL I C+GE Sbjct: 6 VVGNWKLHGSHAFAQALVAQVAAGLPLPGVSVIILPPLLYLSDLTQRFKGEGLAFGAQNVSHHDKGAYTGEVSAAMVADVGAHYTLVGHSERREYHHEDSELVARKFAAALSAGLRPILCVGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LACLS (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 41/134 (30.60%), Postives = 63/134 (47.01%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTK-------ESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N T E++ + ++ + Y+ Q +++AA+NS+ GAFTGE S + D+G +++++GHSERR E D+ I KKA + G I C GE Sbjct: 2 SRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQ-----GSELKLAAENSYFENAGAFTGENSPAAIVDLGVEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LACLM (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 41/134 (30.60%), Postives = 63/134 (47.01%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTK-------ESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N T E++ + ++ + Y+ Q +++AA+NS+ GAFTGE S + D+G +++++GHSERR E D+ I KKA + G I C GE Sbjct: 2 SRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQ-----GSELKLAAENSYFENAGAFTGENSPAAIVDLGIEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LACLA (Triosephosphate isomerase OS=Lactococcus lactis subsp. lactis GN=tpiA PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 41/134 (30.60%), Postives = 63/134 (47.01%), Query Frame = 1 Query: 295 SNKFFVGGNWKCNGTK-------ESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 S K + GNWK N T E++ + ++ + Y+ Q +++AA+NS+ GAFTGE S + D+G +++++GHSERR E D+ I KKA + G I C GE Sbjct: 2 SRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQ-----GSELKLAAENSYFENAGAFTGENSPAAIVDLGVEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_ENTFA (Triosephosphate isomerase OS=Enterococcus faecalis GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 41/127 (32.28%), Postives = 61/127 (48.03%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDA-KLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N T + +A +++ + +L D +++AAQN + GAFTGE S + D+G +V++GHSERR E D+ I KKA + G+ I C GE Sbjct: 3 KPIIAGNWKMNKTLSEAQSFAEAVKNAVPSNDVVDAVIGSPALFLAPLAWNLKDSEVKLAAQNCYWENAGAFTGENSPAAIADLGVDYVIIGHSERREYFHETDEDINKKAKAIFANGMTPIFCCGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPB (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain BS1) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 301 KFFVGGNWKCN-GTKESI---TKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K V GNWK N E + + ++ +L+ K+ + + +V + I + AQN GA+TGE+SV L +GC ++++GHSERR GE ++ + + AL G+ VI CIGE Sbjct: 3 KKIVVGNWKMNKNVAEGVALASSILENLDGGKMACEVGIAPA--YPVLSEVGRVIEGSDICLVAQNCHYEDEGAYTGEVSVRMLDSLGCSYIIVGHSERRQYFGETNRTVNLRLKKALEGGMRVILCIGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_BARQU (Triosephosphate isomerase OS=Bartonella quintana GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 286 MASSNKFFVGGNWKCNGTKESITKL--VSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 M+ + + F+ GNWK NGT ES+ +L ++ + L + + ++L+ + + + QN G +TG+IS LK+ G V++GHSERR V E D + K A GL + C+GE Sbjct: 1 MSPNIRPFIAGNWKMNGTVESLGELRAIAAGVSSDLGHLFEALICVPATLLSRASDALSGENLLLGGQNCHFDDCGPYTGDISAFMLKEAGASHVIIGHSERRTVYQESDAIVCAKVQAAWRAGLVALICVGE 133
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_BACSK (Triosephosphate isomerase OS=Bacillus clausii (strain KSM-K16) GN=tpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 40/127 (31.50%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N T V + + + +++D++ ++ ++I AQ GAFTGEIS + L D+G +V++GHSERR + E D+ + KK A + L I C GE Sbjct: 3 KPIIAGNWKMNKTIGEAVDFVEAVKANVPAQATVDSVVCAPALFLDRLLQAVKGTELKIGAQTMHFEDNGAFTGEISPKALSDMGVHYVIIGHSERREMFAETDETVNKKVHAAFAHHLVPIMCCGE 129 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |