FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSEE4 (Triosephosphate isomerase OS=Pseudomonas entomophila (strain L48) GN=tpiA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19 Identity = 50/124 (40.32%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVG-KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +GT+ S+ +L L + L +++ QV + L + I + AQNS V + GA TGE++ QL ++GCK+V++GHSERR +IGE D+ + +K A A GL + CIGE Sbjct: 6 VAGNWKMHGTRASVVELTQGLGNMSLPSGVEVAVFPPSLFVTQVIDGLEGKGINVGAQNSAVQPEQGALTGEVAPSQLAEVGCKYVLVGHSERRQIIGESDEVLNQKFAAAQKSGLTPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.727e-19 Identity = 50/124 (40.32%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 307 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQ-VKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 F+GGN+KCNG+ + I V+ + K+ V++ + + + ++ IAAQN ++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI C+GE Sbjct: 7 FIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MAGSM (Triosephosphate isomerase OS=Magnetococcus sp. (strain MC-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19 Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLND--AKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK NGT ++ T L + + D A + F + V+ + +++ AQN V GAFTGEIS E LKD+GC +V+LGHSERR + GE ++ + +K A A +GL I C+GE Sbjct: 6 IAGNWKLNGTTQAATALATAVRDGVAANKPDCDVLVCPTFTVLSAVQGVVAGSGVDLGAQNMAVASSGAFTGEISGEMLKDVGCSYVILGHSERRTLFGETNEQVAQKVASAYRDGLTPILCVGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_RUTMC (Triosephosphate isomerase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=tpiA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 48/126 (38.10%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + + GNWK N +KE+ LV + + +Y+ QV+ + D ++ + AQN V K GAFTGEIS + +KD G K+V++GHSERR + GE D+ + +K AL L + CIGE Sbjct: 3 QIIIAGNWKMNASKEATNTLVIGILSGMADVKSKVIVCVPSLYMSQVEVLVVDSQLNLGAQNLNVNKLGAFTGEISADMIKDFGAKYVIVGHSERRSLYGETDEIVAQKVQVALDNNLTPLFCIGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_AEDTO (Triosephosphate isomerase (Fragment) OS=Aedes togoi GN=Tpi PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 50/110 (45.45%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 346 SITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 SI +L L L Y+ ++ L D + +AAQN + GAFTGEIS LKD+ WV+LGHSERR + GE D+ I K A+AL+EGL VIACIGE Sbjct: 1 SIAELCKVLTTGPLNADTEVVVGCPAPYLTLARSQLPDSVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGE 110
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPI2_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 50/124 (40.32%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 307 FVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 F+GGN+KCNG+ + I V+ + K+ FV++ + T + ++IAAQN ++ GA+TGE SVE L D+G V++GHSERR ++GE ++ KKA AL +G+ VI C GE Sbjct: 7 FIGGNFKCNGSLDFIKSHVASIASYKIPESVDVVVAPSFVHLSTAIAANTSKCLKIAAQNVYLEGNGAWTGETSVEMLLDMGLSHVIIGHSERRRIMGETNEQSAKKAKRALDKGMTVIFCTGE 130
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_HAHCH (Triosephosphate isomerase OS=Hahella chejuensis (strain KCTC 2396) GN=tpiA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18 Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK NG+ E L+ + +AK F Y+ V+++++D IE+ +QN + GA+TGE+S + D+ C WV+LGHSERR + E+D+ I K A+ GL I C+GE Sbjct: 3 KKLIAGNWKSNGSLERNKALLEGIVNAKALGSVDVVVCPPFPYLQSVESAVSDSMIELGSQNCSATEDGAYTGEVSAKMCADMKCSWVILGHSERRALYAENDEVIACKVKRAVESGLAPILCVGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPW (Triosephosphate isomerase OS=Pseudomonas putida (strain W619) GN=tpiA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18 Identity = 49/124 (39.52%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVG-KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +GT+ S+ +L L + + ++I++V + L + I + AQNS V + GA TGE++ QL ++GCK+V++GHSERR VIGE ++ + +K A A GL + CIGE Sbjct: 6 VAGNWKMHGTRASVAELTQGLGNMLIPEGIEVAVFPPALFINEVIDGLKGKGITVGAQNSAVQPEQGALTGEVAPSQLAEVGCKFVLIGHSERRQVIGESEEVLNRKFAAAQKSGLTPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_YERE8 (Triosephosphate isomerase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=tpiA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18 Identity = 50/124 (40.32%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG+ + +L+++L + +Y++Q K+ L+ RI + AQN V GAFTGE S E LKDIG +++++GHSERR E D+FI KK GL + CIGE Sbjct: 6 VMGNWKLNGSTHMVNELIANLRKELSTVEGCGVAIAPPAIYLNQAKHELSGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDEFIAKKFGVLKEVGLTPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_CULPI (Triosephosphate isomerase (Fragment) OS=Culex pipiens GN=Tpi PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18 Identity = 49/110 (44.55%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 346 SITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 SIT+L L L Y+ ++ L D + +AAQN + GAFTGEIS LKD+ WV+LGHSERR + GE + I K +AL+EGL VIACIGE Sbjct: 1 SITELCKVLTTGPLNADTEVVVGCPAPYLSLARSQLPDTVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESGELIADKIVHALAEGLKVIACIGE 110 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |