FC876189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_ERWCT (Triosephosphate isomerase OS=Erwinia carotovora subsp. atroseptica GN=tpiA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18 Identity = 51/124 (41.13%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG+ + +L++ L + +Y+DQ + L RI + AQN V GAFTGE S E LKDIG K++++GHSERR E D+FI KK GL + CIGE Sbjct: 6 VMGNWKLNGSTNLVNELIAGLRKELSTVDGCGVAIAPPAIYLDQANHQLAGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFGVLKDAGLIPVLCIGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_VESOH (Triosephosphate isomerase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=tpiA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 44/123 (35.77%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 + GNWK N +KE+ LV D+ ++ F Y+ QV+ + ++ + AQ+ + K GAFTGE+SV+ +KD G ++V++GHSERR + E+++ + +K AL+ L + CIGE Sbjct: 6 IAGNWKMNASKEATNILVMDILSGMVDVKSKVIICVPFPYMAQVEALVGCSQLNLGAQDLNINKSGAFTGEVSVDMIKDFGARYVIVGHSERRSLYFENNEIVAQKVQVALNNNLTPLLCIGE 128
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSEAE (Triosephosphate isomerase OS=Pseudomonas aeruginosa GN=tpiA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 50/124 (40.32%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGK-GGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +GT S+ +L+ L L ++I QV L + I++ AQNS V GA TGE + QL D+GC V++GHSERR ++GE D+ + +K A A S GL + C+GE Sbjct: 6 VAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSEAB (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=tpiA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 50/124 (40.32%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGK-GGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +GT S+ +L+ L L ++I QV L + I++ AQNS V GA TGE + QL D+GC V++GHSERR ++GE D+ + +K A A S GL + C+GE Sbjct: 6 VAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA8 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain LESB58) GN=tpiA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18 Identity = 50/124 (40.32%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGK-GGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +GT S+ +L+ L L ++I QV L + I++ AQNS V GA TGE + QL D+GC V++GHSERR ++GE D+ + +K A A S GL + C+GE Sbjct: 6 VAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_MARAV (Triosephosphate isomerase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=tpiA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLND--AKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG+K+ + +LV + + + +Y+DQV RI AQN + GA+TGEIS E +D+GC +V++GHSERR + GE D K L GL + C+GE Sbjct: 6 VAGNWKMNGSKDLVKQLVGAVREQSGSVGEDVEVVIIPPAIYLDQVAEQGGGRITTGAQNVSQWQSGAYTGEISAEMARDMGCGYVLVGHSERRQLFGETDSVAAAKVEQVLLSGLVAVLCVGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPC (Triosephosphate isomerase OS=Legionella pneumophila (strain Corby) GN=tpiA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDA-KLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK NG + +T+LVS + + + +YI +V++ L T RI + AQN + GA+TGE+S LKD C++V++GHSERR ED+ F+ +K + G+ I C+GE Sbjct: 6 VAGNWKMNGQIQQVTELVSQIEELIGFDCAAQVAVMPPSIYIPKVRDCLRTGRIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPILCVGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPF (Triosephosphate isomerase OS=Pseudomonas fluorescens (strain Pf0-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 51/124 (41.13%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWV-GKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +GT+ S+ +L++ L L +YI+QV + L + I + AQNS V GA TGEI+ QL D GC V++GHSERR ++GE D + +K A A + GL + C+GE Sbjct: 6 VAGNWKMHGTRASVAELINGLRHLALPSGVDVAVFPPCLYINQVIDGLKGKSISVGAQNSAVESMQGALTGEIAPSQLVDAGCSLVLVGHSERRQIMGERDGMLNRKFAAAQACGLIPVLCVGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_PSEF5 (Triosephosphate isomerase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tpiA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 51/124 (41.13%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 310 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWV-GKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 V GNWK +GT+ S+ +L++ L L +YI+QV + L + I++ AQNS V GA TGEI+ QL D GC V++GHSERR ++GE D + +K A A + GL + C+GE Sbjct: 6 VAGNWKMHGTRASVAELINGLRHLALPSGVDVAVFPPCLYINQVIDGLKGKSIQVGAQNSAVESMQGALTGEIAPSQLVDAGCSLVLVGHSERRLIMGERDATLNRKFAAAQACGLKPVLCVGE 129
BLAST of FC876189 vs. ExPASy Swiss-Prot
Match: TPIS_ALKOO (Triosephosphate isomerase OS=Alkaliphilus oremlandii (strain OhILAs) GN=tpiA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 48/126 (38.10%), Postives = 67/126 (53.17%), Query Frame = 1 Query: 301 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 675 K + GNWK N + LV+ + D + F + QV+ +L +++ AQN + GA+TGEIS LKDIG ++V+LGHSERR E D+ + KK A+ E L I CIGE Sbjct: 3 KPIIAGNWKMNKVSKEALDLVNQIKDEVHKTEVEVVVCCPFTVLSQVQKALVGTNLKLGAQNMHWEEDGAYTGEISANMLKDIGVEYVILGHSERRQYFNETDETVNKKVKKAIKENLKPIVCIGE 128 The following BLAST results are available for this feature:
BLAST of FC876189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876189 ID=FC876189; Name=FC876189; organism=Citrus clementina; type=EST; length=678bpback to top |