FC876190

Overview
NameFC876190
Unique NameFC876190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10210 contig Ccv1_Contig10210:9..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.454e-73
Identity = 138/183 (75.41%), Postives = 148/183 (80.87%), Query Frame = 3
Query:  156 GSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDP-AKNVDG-CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            G ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD  A   D  C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y+VAQCLGAI GVGLVKAFQ +Y+ RYGGGAN LA GYS G GLAAEIIGTFVLVYTVFSATDP
Sbjct:   14 GEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDP 196          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 5.892e-73
Identity = 138/193 (71.50%), Postives = 153/193 (79.27%), Query Frame = 3
Query:  126 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            MAKD   A   ++  KDY+DPPP PL DA ELTKWS YRA+IAEF+A            IGYK QTD A +     C GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARKVSLVRA++Y+VAQCLGAI GVGLVK FQ ++Y RYGGGANEL+ GYS G GLAAEIIGTFVLVYTVFSATDP
Sbjct:    1 MAKDIEAA--AAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDP 191          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 5.892e-73
Identity = 142/196 (72.45%), Postives = 152/196 (77.55%), Query Frame = 3
Query:  126 MAKDTGV---AEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDP-AKNVDG-CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            M KD  +   A  G ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD  A   D  C GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y+VAQCLGAI GVGLVKAFQ +Y+ RYGGGAN LA GYS G GL AEIIGTFVLVYTVFSATDP
Sbjct:    1 MGKDDVIESGAGGGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDP 196          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.233e-71
Identity = 137/193 (70.98%), Postives = 147/193 (76.17%), Query Frame = 3
Query:  126 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            M K+  V+   +  A+DY DPPP PL D  EL KWS YRALIAEF+A            IGYK QTD A N     C GVG+LGIAWAFGGMIF+LVYCTAG+SGGHINPAVT GLFLARKVSLVRA++YM AQCLGAI GV LVK FQ S Y RYGGGANELA GYSTG GLAAEIIGTFVLVYTVFSATDP
Sbjct:    1 MGKEVDVSTLEAGGARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDP 193          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 7.203e-71
Identity = 137/195 (70.26%), Postives = 147/195 (75.38%), Query Frame = 3
Query:  126 MAKDTG-VAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDG---CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            MAKD   V E G YSAKDY DPPP PL D  ELTKWS YRA IAEFIA            IGYK Q+D    + G   C GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSLVRA++YM+AQC GAI G GL K FQKS+Y RYGGG N ++DGY+ G  L AEIIGTFVLVYTVFSATDP
Sbjct:    1 MAKDVEQVTEQGEYSAKDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDT--KIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDP 193          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.605e-70
Identity = 135/191 (70.68%), Postives = 146/191 (76.44%), Query Frame = 3
Query:  126 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            M KD  + E  S S KDY DPPP   F+  EL KWSFYRA+IAEFIA            IG+KSQTD       CA VG+LGI+WAFGGMIF+LVYCTAGISGGHINPAVTFGLFLA KVSLVRAV YMVAQCLGA  GVGLVK FQ +YY RYGGGAN L+DGY+ GVG+ AEIIGTFVLVYTVFSATDP
Sbjct:    1 MTKDE-LTEEESLSGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDP 190          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.575e-70
Identity = 134/193 (69.43%), Postives = 148/193 (76.68%), Query Frame = 3
Query:  126 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            M K+  V   G    +DY DPPP PL D  EL +WS YRA+IAEF+A            IGYK QTD + + D   C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y+VAQCLGA+ GV LVK FQ S+Y RYGGGANELA GYS G GLAAEIIGTFVLVYTVFSATDP
Sbjct:    1 MGKEADVEAGG---VRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDP 190          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.317e-69
Identity = 132/190 (69.47%), Postives = 144/190 (75.79%), Query Frame = 3
Query:  135 DTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVD--GCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            D    E G    +DY DPPP PL D  EL KWS YRA+IAEF+A            IGYK QTD + +     C+GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++YM AQ LGAI GV LVK FQ  +Y RYGGGANE++ GYSTG GLAAEIIGTFVLVYTVFSATDP
Sbjct:    6 DVSTLEAGGVRDRDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDP 195          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.562e-68
Identity = 134/185 (72.43%), Postives = 142/185 (76.76%), Query Frame = 3
Query:  144 VAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            V+E G +  KDY DPPP PL D  EL  WSFYRA+IAEFIA            IG+K+QT P      C GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL RAV YMVAQCLGAI GVGLVKAF  + Y R GGGAN +ADGYSTG  L AEIIGTFVLVYTVFSATDP
Sbjct:    5 VSEEGRHG-KDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGP------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDP 182          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 3.699e-67
Identity = 132/186 (70.97%), Postives = 141/186 (75.81%), Query Frame = 3
Query:  144 VAEHG-SYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 698
            V+E G ++  KDY DPPP PL D  EL  WSFYRALIAEFIA            IG+K QT P      C GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRA+ YM+AQCLGAI GVG VKAF K+ Y   GGGAN +ADGYS G  L AEIIGTFVLVYTVFSATDP
Sbjct:    5 VSEEGKTHHGKDYVDPPPAPLLDMGELKSWSFYRALIAEFIATLLFLYVTVATVIGHKKQTGP------CDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDP 184          
The following BLAST results are available for this feature:
BLAST of FC876190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
PIP21_ORYSJ3.454e-7375.41Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE5.892e-7371.50Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP21_MAIZE5.892e-7372.45Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP24_ORYSJ3.233e-7170.98Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP27_MAIZE7.203e-7170.26Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP26_ARATH1.605e-7070.68Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP25_ORYSJ3.575e-7069.43Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP26_MAIZE2.317e-6969.47Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP28_ARATH2.562e-6872.43Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH3.699e-6770.97Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]

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Properties
Property NameValue
Genbank descriptionC32001D12EF DevOvary1 Citrus clementina cDNA clone C32001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876190 ID=FC876190; Name=FC876190; organism=Citrus clementina; type=EST; length=698bp
GAAAACAAGCAAAAAAAAGAAAAAGAAAAAGAAAAAGGAAAAGGCTTCTC
TCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCT
CCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGGCAG
AGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCG
CTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGAT
AGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTG
TCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGT
GCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCATGATCTT
TGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCCGG
CAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTGCT
GTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTGTTGGGTT
GGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGCCA
ACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGCCGAGATC
ATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACTGATCCC
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