FC876190

Overview
NameFC876190
Unique NameFC876190
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21
Identity = 65/167 (38.92%), Postives = 89/167 (53.29%), Query Frame = 3
Query:  210 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYK-----SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            A E  K  F+RA++AEF+A            +G+K     +QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+MY++AQC+GAI    ++     S  T    G N+LADG ++G GL  EIIGT  LV  V + TD
Sbjct:    2 ASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS-LTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTD 158          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 64/167 (38.32%), Postives = 88/167 (52.69%), Query Frame = 3
Query:  210 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYK-----SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            A E  K  F+RA++AEF+A            +G+K     +QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+MY++AQC+GAI    ++     S       G N+LADG ++G GL  EIIGT  LV  V + TD
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS-LPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTD 158          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20
Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 3
Query:  210 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            A E  K  F+RA++AEF+A            +G+        N    A    + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G NELA G ++G GL  EIIGT  LV  V + TD
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPV--RNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTD 160          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 63/167 (37.72%), Postives = 89/167 (53.29%), Query Frame = 3
Query:  210 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGY-----KSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            A E+ K  F+RA++AEF+A            +G+     ++QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N+LA G ++G GL  EIIGT  LV  V + TD
Sbjct:    2 ASEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTD 158          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20
Identity = 63/167 (37.72%), Postives = 89/167 (53.29%), Query Frame = 3
Query:  210 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGY-----KSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            A E+ K  F+RA++AEF+A            +G+     ++QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N+LA G ++G GL  EIIGT  LV  V + TD
Sbjct:    2 ASEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTD 158          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20
Identity = 62/162 (38.27%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  210 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            A E  K  F+RA++AEF+A            +G+  Q     N    A    + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N LA G  +G GL  EIIGT  LV  V + TD
Sbjct:    2 ASEFKKKIFWRAVVAEFLAMTLFIFISIGSALGF--QYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSS-LPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTD 160          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19
Identity = 57/162 (35.19%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  210 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            A E  K +F+RA+IAEF+A            +G+    +   N        I+ ++ AFG  I  +      +SG H+NPAVT G  L+ ++S+++AVMY++AQCLGA+    ++     S       G N L+ G S G GL  EI+ TF LV  V + TD
Sbjct:    2 ASEFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGI-TSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTD 162          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19
Identity = 61/163 (37.42%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  210 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGV-GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            A E  K  F+RA++AEF+A            +G+     P K+      V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+MY++AQC+GAI    ++     S       G N LA G ++G GL  EIIGT  LV  V + TD
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHY---PIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD 160          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19
Identity = 61/163 (37.42%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  210 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGV-GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            A E  K  F+RA++AEF+A            +G+     P K+      V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+MY++AQC+GAI    ++     S       G N LA G ++G GL  EIIGT  LV  V + TD
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHY---PIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD 160          
BLAST of FC876190 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17
Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = 3
Query:  231 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 695
            +F++A+ AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y++AQCLGAI G G++           G G   +    + G GL  E+I TF LV+T+F++ D
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCD 179          
The following BLAST results are available for this feature:
BLAST of FC876190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
AQP1_HUMAN2.350e-2138.92Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB1.166e-2038.32Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA1.523e-2038.27Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE1.989e-2037.72Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT4.431e-2037.72Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PIG5.787e-2038.27Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQPA_RANES1.684e-1935.19Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_BOVIN3.751e-1937.42Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP6.398e-1937.42Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP4_MOUSE1.576e-1734.84Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32001D12EF DevOvary1 Citrus clementina cDNA clone C32001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876190 ID=FC876190; Name=FC876190; organism=Citrus clementina; type=EST; length=698bp
GAAAACAAGCAAAAAAAAGAAAAAGAAAAAGAAAAAGGAAAAGGCTTCTC
TCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCT
CCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGGCAG
AGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCG
CTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGAT
AGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTG
TCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGT
GCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCATGATCTT
TGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCCGG
CAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTGCT
GTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTGTTGGGTT
GGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGCCA
ACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGCCGAGATC
ATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACTGATCCC
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