FC876201

Overview
NameFC876201
Unique NameFC876201
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:1285..1985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 5.133e-117
Identity = 208/233 (89.27%), Postives = 222/233 (95.28%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSR+KAL GGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFSELVNDFYNNGLPSNL+GGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMS+TFLV LCQA+DLRH+EENLK+TVKNTVSQVAK+VLT+G +GELHPSR CEKDLLK  D+EHVFAYIDDPCSATYPLMQKLRQVLVEHAL +GE E  + +SI
Sbjct:  349 DNPLIDVSRSKALQGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTFLVGLCQAVDLRHIEENLKNTVKNTVSQVAKRVLTMGFNGELHPSRLCEKDLLKLVDKEHVFAYIDDPCSATYPLMQKLRQVLVEHALVNGERETNSTTSI 581
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 1.951e-116
Identity = 204/233 (87.55%), Postives = 222/233 (95.28%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKL+FAQFSELVNDFYNNGLPSNLS  RNPSLDYGFKG+EIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKT EA++IL+LMSSTFL+ALCQAIDLRHLEENLK++VKNTVSQVAKK LT+G SGELHPSRFCEKDLLK  DREHVF+YIDDPCSATYPL QKLRQVLV+HAL +GE+EK +N+SI
Sbjct:  392 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTKEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTIGVSGELHPSRFCEKDLLKVVDREHVFSYIDDPCSATYPLAQKLRQVLVDHALVNGESEKNSNTSI 624
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 1.951e-116
Identity = 207/233 (88.84%), Postives = 220/233 (94.42%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLS GRNPSLDYGFKGAEIAMASYCSELQ LANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMS+TFLV LCQA+DLRHLEENLK+ VKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  DRE+VFAY DDPCS+TYPLMQKLR V+VEHAL +G  EK +N+SI
Sbjct:  371 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSSGRNPSLDYGFKGAEIAMASYCSELQALANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTFLVGLCQAVDLRHLEENLKNAVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLIKVIDREYVFAYADDPCSSTYPLMQKLRAVIVEHALNNGVKEKDSNTSI 603
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 2.548e-116
Identity = 205/233 (87.98%), Postives = 222/233 (95.28%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDN RLA+A+IGKLMFAQFSELVND+YNNGLPSNL+ GRNPSLDYGFKG+EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENL++ VKNTVSQVAK+ LT+GA+GELHPSRFCEKDLL+  DRE+VF Y DD CSA YPLMQKLRQVLV+HAL++GENEK ANSSI
Sbjct:  379 DNPLIDVSRNKALHGGNFQGTPIGVSMDNARLALASIGKLMFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGSEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLRNAVKNTVSQVAKRTLTMGANGELHPSRFCEKDLLRVVDREYVFRYADDACSANYPLMQKLRQVLVDHALENGENEKNANSSI 611
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.327e-116
Identity = 206/233 (88.41%), Postives = 222/233 (95.28%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIA+IGKLMFAQFSELVNDFYNNGLPSNL+G RNPSLDYGFKGAEIAMASYCSELQ+LANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAV+ILKLMSSTFLVALCQAIDLRH+EENLK  VKNTVSQVAK+VLTVG +GELHPSRFCEKDLL   +RE+VFAYIDDPCSATYPLMQKLR VLV+HAL++G+ E  +++SI
Sbjct:  385 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGSRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRHIEENLKSVVKNTVSQVAKRVLTVGVNGELHPSRFCEKDLLNVVEREYVFAYIDDPCSATYPLMQKLRHVLVDHALENGDREGNSSTSI 617
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.327e-116
Identity = 203/233 (87.12%), Postives = 222/233 (95.28%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVND+YNNGLPSNL+ GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+GA GELHP+RFCEK+LL+  DRE++F Y DDPCS+TYPLMQKLRQVLV+HA+K+GE+EK  NSSI
Sbjct:  387 DNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTIGAIGELHPARFCEKELLRVVDREYLFTYADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNINSSI 619
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 417.157 bits (1071), Expect = 4.346e-116
Identity = 205/233 (87.98%), Postives = 221/233 (94.85%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVNDFYNNGLPSNLS  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLIS+RKT EA++IL+LMSSTFL+ALCQAIDLRHLEENLK++VKNTVSQVAKK LT+G +GELHPSRFCEKDLLK  DREHVFAYIDDPCSATYPL QKLRQVLV+HAL +GE+EK  N+SI
Sbjct:  392 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISARKTNEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTMGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNFNTSI 624
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.264e-115
Identity = 203/233 (87.12%), Postives = 221/233 (94.85%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKA+HGGNFQGTPIGVSMDN RLAIA+IGKL+FAQFSELVNDFYNNGLPSNL+  RNPSLDYGFKGAEIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMS+TFLVALCQAIDLRHLEENLK  VKNTVSQV+K+VLT GA+GELHPSRFCEK+LLK  DRE+VFAY+DDPCSATYPLMQKLRQV V+HAL++GENEK  ++S+
Sbjct:  382 DNPLIDVSRNKAIHGGNFQGTPIGVSMDNVRLAIASIGKLLFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTFLVALCQAIDLRHLEENLKSAVKNTVSQVSKRVLTTGANGELHPSRFCEKELLKVVDREYVFAYVDDPCSATYPLMQKLRQVFVDHALENGENEKNFSTSV 614
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_HELAN (Phenylalanine ammonia-lyase OS=Helianthus annuus GN=PAL PE=2 SV=2)

HSP 1 Score: 415.616 bits (1067), Expect = 1.264e-115
Identity = 206/233 (88.41%), Postives = 219/233 (93.99%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGK+  AQFSELVNDFYNNGLPS+LSGGRNPSLD GFKG EIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQ+IDLRHLEEN+K TVKNTVSQVAKKVLT+G +GELHPSRFCEKDLL+  DRE+VFAY DDPC  TYPLMQKLRQVLV+HAL +GE EK AN+SI
Sbjct:  378 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKVTIAQFSELVNDFYNNGLPSHLSGGRNPSLDSGFKGGEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQSIDLRHLEENMKSTVKNTVSQVAKKVLTMGVNGELHPSRFCEKDLLRVVDREYVFAYADDPCLTTYPLMQKLRQVLVDHALNNGETEKNANTSI 610
[Close]
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 414.846 bits (1065), Expect = 2.157e-115
Identity = 204/233 (87.55%), Postives = 218/233 (93.56%), Query Frame = 1 
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVNDFYNNGLPSNLS  RNPSLDYGFKG EIAMASYCSELQ+LANPVT+HVQSAEQHNQDVNSLGLIS+RKT EAV+ILKLMS T+L+ALCQAIDLRHLEENLK+TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+ FAYIDDPCSATYPLMQKLRQVLVEHAL + ENEK  N+SI
Sbjct:  382 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAVASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGTEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISARKTNEAVEILKLMSPTYLIALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKIVDREYCFAYIDDPCSATYPLMQKLRQVLVEHALANAENEKNVNTSI 614
The following BLAST results are available for this feature:
BLAST of FC876201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
PAL1_POPKI5.133e-11789.27Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]
PALY_TRISU1.951e-11687.55Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PALY_BROFI1.951e-11688.84Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PAL3_TOBAC2.548e-11687.98Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL2_CICAR3.327e-11688.41Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_SOLTU3.327e-11687.12Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PALY_MEDSA4.346e-11687.98Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]
PALY_POPTR1.264e-11587.12Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PALY_HELAN1.264e-11588.41Phenylalanine ammonia-lyase OS=Helianthus annuus G... [more]
PALY_STYHU2.157e-11587.55Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]

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Properties
Property NameValue
Genbank descriptionC32001F04EF DevOvary1 Citrus clementina cDNA clone C32001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876201 ID=FC876201; Name=FC876201; organism=Citrus clementina; type=EST; length=701bp
GACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATGGTGGCAA
TTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCTA
TTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACTTGTCAAC
GATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCC
TAGCCTGGATTATGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATT
GTTCGGAGCTCCAATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGT
GCTGAACAGCACAACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAG
GAAGACTGCTGAAGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCT
TGGTAGCGCTTTGCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTG
AAGCATACAGTCAAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAAC
CGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATC
TGCTCAAAGCGGCTGATCGCGAACACGTCTTTGCATACATTGATGACCCC
TGCAGTGCTACCTATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGA
GCACGCACTGAAACATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCT
T
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