FC876201

Overview
NameFC876201
Unique NameFC876201
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:1285..1985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSI (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. indica GN=ZB8 PE=3 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 2.162e-107
Identity = 193/233 (82.83%), Postives = 209/233 (89.70%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSR KALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFL NPVTNHVQSAEQHNQDVNSLGLISSRKTAEA+DILKLMSSTFL+ALCQA+DLRH+EEN+K  VK+ V  VAKK L+  ++G+LH +RFCEKDLLK  DRE VFAY DDPCS  YPLM+KLR VLVE AL +G  E  A++S+
Sbjct:  380 DNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTVAKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALANGAAEFNADTSV 612          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=ZB8 PE=2 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 1.073e-106
Identity = 192/233 (82.40%), Postives = 208/233 (89.27%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNPLIDVSR KALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFL NPVTNHVQSAEQHNQDVNSLGLISSRKT EA+DILKLMSSTFL+ALCQA+DLRH+EEN+K  VK+ V  VAKK L+  ++G+LH +RFCEKDLLK  DRE VFAY DDPCS  YPLM+KLR VLVE AL +G  E  A++S+
Sbjct:  380 DNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTDEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTVAKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALANGAAEFNADTSV 612          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_PINTA (Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL PE=3 SV=1)

HSP 1 Score: 372.859 bits (956), Expect = 9.399e-103
Identity = 182/233 (78.11%), Postives = 206/233 (88.41%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            DNP+IDV+R+KALHGGNFQGTPIGVSMDN RL+I+AIGKLMFAQFSELVND+YN GLPSNLSGG NPSLDYG KGAEIAMASY SEL +LANPVT+HVQSAEQHNQDVNSLGL+S+RK+AEA+DILKLM ST+L ALCQA+DLRHLEEN+  TVK  VSQVAKK L+ G +GEL P RFCEKDLL+  D EHVF+YIDDPC+A+YPL QKLR +LVEHA K+ E EK  N+SI
Sbjct:  386 DNPVIDVARDKALHGGNFQGTPIGVSMDNLRLSISAIGKLMFAQFSELVNDYYNGGLPSNLSGGPNPSLDYGLKGAEIAMASYTSELLYLANPVTSHVQSAEQHNQDVNSLGLVSARKSAEAIDILKLMLSTYLTALCQAVDLRHLEENMLATVKQIVSQVAKKTLSTGLNGELLPGRFCEKDLLQVVDNEHVFSYIDDPCNASYPLTQKLRNILVEHAFKNAEGEKDPNTSI 618          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 368.622 bits (945), Expect = 1.773e-101
Identity = 182/230 (79.13%), Postives = 204/230 (88.70%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTAN 690
            DNP+IDV R KALHGGNFQGTPIGVSMDN RLAIA IGKLMFAQFSELVN+FYNNGL SNL+G RNPSLDYGFKG EIAMASYCSELQ+LANP+TNHVQSAEQHNQDVNSLGL+S+RKT EAVDILKLM+ST++VALCQA+DLRHLEEN+K +VKN V+QVAKKVLT+  +G+L  +RF EK+LL A DRE VF+Y DDPCSA YPLMQKLR VLVEHAL  G+ E  A+
Sbjct:  370 DNPVIDVHRGKALHGGNFQGTPIGVSMDNARLAIANIGKLMFAQFSELVNEFYNNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLANPITNHVQSAEQHNQDVNSLGLVSARKTLEAVDILKLMTSTYIVALCQAVDLRHLEENIKSSVKNCVTQVAKKVLTMNPTGDLSSARFSEKNLLTAIDREAVFSYADDPCSANYPLMQKLRAVLVEHALTSGDAEPEAS 599          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL2_SOLTU (Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanum tuberosum GN=PAL-2 PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 3.949e-101
Identity = 178/201 (88.56%), Postives = 192/201 (95.52%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPC 603
            DNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLA+A+IGKLMFAQFSELVND+YNNGLPSNL+ GRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+G  GELHP+RFCEK+LL+  DRE++FAY DDPC
Sbjct:  390 DNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDYYNNGLPSNLTAGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTIGVLGELHPARFCEKELLRVVDREYLFAYADDPC 590          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL3_PHAVU (Phenylalanine ammonia-lyase class 3 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 5.715e-92
Identity = 168/230 (73.04%), Postives = 194/230 (84.35%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTAN 690
            DNPLIDV+RNKA+ GGNFQGTPIGVSMDN RLA+A+IGKL+FAQF+EL ND YNNGLPSNLS GRNPSLDYGFK +E+AMA+YCSELQ+LANPVT+HVQS EQHNQDVNSLGLIS+ KT EA++ILKLMSST+LVALCQAIDLRHLEE  K+TVKNTVS+VA K LT     E +P RF E++LLK  DRE+VF+YIDDP +  YPLM KL+QVL E A     N+K  +
Sbjct:  378 DNPLIDVTRNKAVSGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELANDLYNNGLPSNLSVGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSTEQHNQDVNSLGLISALKTVEAIEILKLMSSTYLVALCQAIDLRHLEEIFKNTVKNTVSRVALKTLTTEDKEETNPFRFSEEELLKVVDREYVFSYIDDPLNVRYPLMPKLKQVLYEQAHTSVINDKNVS 607          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PAL3_ARATH (Phenylalanine ammonia-lyase 3 OS=Arabidopsis thaliana GN=PAL3 PE=1 SV=3)

HSP 1 Score: 328.176 bits (840), Expect = 2.655e-89
Identity = 170/226 (75.22%), Postives = 186/226 (82.30%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENE 678
            DNPLIDVSRNKA+HGGNFQGTPIGV+MDNTRLA+A+IGKLMFAQF+ELVNDFYNNGLPSNLSGGRNPSLDYG KGAE+AMASYCSELQFLANPVTNHV+SA QHNQDVNSLGLISSR TAEAV ILKLMS+T+LVALCQA DLRHLEE LK  V   VS  AK VL +       P R    D+L   +RE+VF+Y+DDP S T PLMQKLR VL + AL   E E
Sbjct:  371 DNPLIDVSRNKAIHGGNFQGTPIGVAMDNTRLALASIGKLMFAQFTELVNDFYNNGLPSNLSGGRNPSLDYGLKGAEVAMASYCSELQFLANPVTNHVESASQHNQDVNSLGLISSRTTAEAVVILKLMSTTYLVALCQAFDLRHLEEILKKAVNEVVSHTAKSVLAI------EPFR-KHDDILGVVNREYVFSYVDDPSSLTNPLMQKLRHVLFDKALAEPEGE 589          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_MALDO (Phenylalanine ammonia-lyase (Fragment) OS=Malus domestica GN=PAL PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.768e-60
Identity = 113/132 (85.61%), Postives = 125/132 (94.70%), Query Frame = 1
Query:  304 EQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALKHGENEKTANSSI 699
            EQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQ+IDLRHLEENL++TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+VFAYIDDPCSATYPLMQKLR+VL+EHAL +GE+EK A++SI
Sbjct:    3 EQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQSIDLRHLEENLRNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLREVLIEHALTNGESEKNASTSI 134          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_RHOTO (Phenylalanine ammonia-lyase OS=Rhodosporidium toruloides GN=PAL PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 9.908e-36
Identity = 81/151 (53.64%), Postives = 101/151 (66.89%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLK 453
            DNPLIDV    + HGGNFQ   +  +M+ TRL +A IGKL F Q +E++N   N GLPS L+   +PSL Y  KG +IA A+Y SEL  LANPVT HVQ AE  NQ VNSL LIS+R+T E+ D+L L+ +T L  + QAIDLR +E   K
Sbjct:  396 DNPLIDVENKTSHHGGNFQAAAVANTMEKTRLGLAQIGKLNFTQLTEMLNAGMNRGLPSCLAA-EDPSLSYHCKGLDIAAAAYTSELGHLANPVTTHVQPAEMANQAVNSLALISARRTTESNDVLSLLLATHLYCVLQAIDLRAIEFEFK 545          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: PALY_RHORB (Phenylalanine ammonia-lyase OS=Rhodotorula rubra GN=PAL PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.187e-34
Identity = 79/174 (45.40%), Postives = 111/174 (63.79%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGEL 522
            DNPLID+      HGG F  + +G +M+ TRLA+A +GK+ F Q +E++N   N  LPS L+   +PSL Y  KG +IA A+Y SEL  LANPV+ HVQ AE  NQ +NSL LIS+R+TAEA D+L L+ +T L  + QA+DLR +E       +  V+++ K+     A+ E+
Sbjct:  398 DNPLIDLENKMTHHGGAFMASSVGNTMEKTRLAVALMGKVSFTQLTEMLNAGMNRALPSCLAA-EDPSLSYHCKGLDIAAAAYTSELGHLANPVSTHVQPAEMGNQAINSLALISARRTAEANDVLSLLLATHLYCVLQAVDLRAMEFEHTKAFEPMVTELLKQHFGALATAEV 570          
The following BLAST results are available for this feature:
BLAST of FC876201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
PAL2_ORYSI2.162e-10782.83Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_ORYSJ1.073e-10682.40Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PALY_PINTA9.399e-10378.11Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL ... [more]
PAL1_ORYSJ1.773e-10179.13Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_SOLTU3.949e-10188.56Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanu... [more]
PAL3_PHAVU5.715e-9273.04Phenylalanine ammonia-lyase class 3 OS=Phaseolus v... [more]
PAL3_ARATH2.655e-8975.22Phenylalanine ammonia-lyase 3 OS=Arabidopsis thali... [more]
PALY_MALDO5.768e-6085.61Phenylalanine ammonia-lyase (Fragment) OS=Malus do... [more]
PALY_RHOTO9.908e-3653.64Phenylalanine ammonia-lyase OS=Rhodosporidium toru... [more]
PALY_RHORB3.187e-3445.40Phenylalanine ammonia-lyase OS=Rhodotorula rubra G... [more]

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Properties
Property NameValue
Genbank descriptionC32001F04EF DevOvary1 Citrus clementina cDNA clone C32001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876201 ID=FC876201; Name=FC876201; organism=Citrus clementina; type=EST; length=701bp
GACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATGGTGGCAA
TTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCTA
TTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACTTGTCAAC
GATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCC
TAGCCTGGATTATGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATT
GTTCGGAGCTCCAATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGT
GCTGAACAGCACAACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAG
GAAGACTGCTGAAGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCT
TGGTAGCGCTTTGCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTG
AAGCATACAGTCAAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAAC
CGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATC
TGCTCAAAGCGGCTGATCGCGAACACGTCTTTGCATACATTGATGACCCC
TGCAGTGCTACCTATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGA
GCACGCACTGAAACATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCT
T
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