FC876201

Overview
NameFC876201
Unique NameFC876201
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:1285..1985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_STRPZ (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=hutH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKV 495
            DNP+I       + GGNF G P+    D   +AI+ IG +   +   LVN   +  LPS L   + P L+ GF   + A AS  SE + LA+P +     + ++ +D  S+G  ++RK  E +   + + +T ++A CQA+DL+     L    K       K+V
Sbjct:  312 DNPII-CKDGHVISGGNFHGEPMAQPFDFLGIAISEIGNVSERRVERLVNSQLSK-LPSFLV--KYPGLNSGFMITQYACASLASENKVLAHPASVDSIPSCENQEDFVSMGTTAARKAFEILKNSRRIVATEIMAACQALDLKSENHELGKGTKVAYDLFRKEV 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BURS3 (Histidine ammonia-lyase OS=Burkholderia sp. (strain 383) GN=hutH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 47/144 (32.64%), Postives = 73/144 (50.69%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 432
            DNPLI     + L GGNF   P+  + DN  LA + IG L   + + L+ D   +GLP  L   R+  ++ GF  A +  A+  SE + LA+P +        + +D  S+   ++RK A+  D  K + +  L+A  Q +DLR
Sbjct:  310 DNPLIFPDTGEVLSGGNFHAEPVAFAADNLALAASEIGALAERRIALLI-DATLSGLPPFLV--RDGGVNSGFMIAHVTAAALASENKTLAHPASVDSLPTSANQEDHVSMATFAARKLADIADNTKHILAIELLAAAQGVDLR 450          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BURCH (Histidine ammonia-lyase OS=Burkholderia cenocepacia (strain HI2424) GN=hutH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 47/144 (32.64%), Postives = 73/144 (50.69%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 432
            DNPLI     + L GGNF   P+  + DN  LA A IG L   + + L+ D   +GLP  L   ++  ++ GF  A +  A+  SE + LA+P +        + +D  S+   ++RK A+  D  K + +  L+A  Q +DLR
Sbjct:  310 DNPLIFPDTGEVLSGGNFHAEPVAFAADNLALAAAEIGALAERRIALLI-DATLSGLPPFLV--KDGGVNSGFMIAHVTAAALASENKTLAHPASVDSLPTSANQEDHVSMATFAARKLADIADNTKHILAIELLAAAQGVDLR 450          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BURCC (Histidine ammonia-lyase OS=Burkholderia cenocepacia (strain MC0-3) GN=hutH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 47/144 (32.64%), Postives = 73/144 (50.69%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 432
            DNPLI     + L GGNF   P+  + DN  LA A IG L   + + L+ D   +GLP  L   ++  ++ GF  A +  A+  SE + LA+P +        + +D  S+   ++RK A+  D  K + +  L+A  Q +DLR
Sbjct:  310 DNPLIFPDTGEVLSGGNFHAEPVAFAADNLALAAAEIGALAERRIALLI-DATLSGLPPFLV--KDGGVNSGFMIAHVTAAALASENKTLAHPASVDSLPTSANQEDHVSMATFAARKLADIADNTKHILAIELLAAAQGVDLR 450          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BURCA (Histidine ammonia-lyase OS=Burkholderia cenocepacia (strain AU 1054) GN=hutH PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 47/144 (32.64%), Postives = 73/144 (50.69%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 432
            DNPLI     + L GGNF   P+  + DN  LA A IG L   + + L+ D   +GLP  L   ++  ++ GF  A +  A+  SE + LA+P +        + +D  S+   ++RK A+  D  K + +  L+A  Q +DLR
Sbjct:  310 DNPLIFPDTGEVLSGGNFHAEPVAFAADNLALAAAEIGALAERRIALLI-DATLSGLPPFLV--KDGGVNSGFMIAHVTAAALASENKTLAHPASVDSLPTSANQEDHVSMATFAARKLADIADNTKHILAIELLAAAQGVDLR 450          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH2_FUSNN (Histidine ammonia-lyase 2 OS=Fusobacterium nucleatum subsp. nucleatum GN=hutH2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 46/143 (32.17%), Postives = 73/143 (51.05%), Query Frame = 1
Query:    1 DNPLIDVSRNKA-LHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAID 426
            DNPLI    N A + GGNF G PI ++MD   + ++ I  +   +  +LVN   ++GLP+ L   +N  ++ GF   +   A+  SE + LA+P +        + +D  S+G I +RK    VD  + + S  L+   QA D
Sbjct:  312 DNPLIFPGENGACISGGNFHGQPIAIAMDTLGILMSEIANISERRIEKLVNPALSHGLPAFLV--KNGGINDGFMIPQYVAAALVSENKVLAHPASVDSIPTSANQEDHVSMGTIGARKARTIVDHAQHVVSIELLCAAQAAD 452          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_STRPG (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=hutH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKV 495
            DNP+I       + GGNF G P+    D   +AI+ IG +   +   LVN   +  LPS L   + P L+ GF   + A AS  SE + LA+P +     + ++ +D  S+G  ++RK  E +   + + +T ++A CQA+DL+     L    K       K+V
Sbjct:  312 DNPII-CKDGHVISGGNFHGEPMAQPFDFLGIAISEIGNVSERRVERLVNSQLSK-LPSFLV--KYPGLNSGFMITQYACASLASENKVLAHPASVDSIPSCENQEDFVSMGTTAARKAFEILKNSRRIVATEIMAACQALDLKPENHELGKGTKVAYDLFRKEV 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_STRP6 (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M6 GN=hutH PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKV 495
            DNP+I       + GGNF G P+    D   +AI+ IG +   +   LVN   +  LPS L   + P L+ GF   + A AS  SE + LA+P +     + ++ +D  S+G  ++RK  E +   + + +T ++A CQA+DL+     L    K       K+V
Sbjct:  312 DNPII-CKDGHVISGGNFHGEPMAQPFDFLGIAISEIGNVSERRVERLVNSQLSK-LPSFLV--KYPGLNSGFMITQYACASLASENKVLAHPASVDSIPSCENQEDFVSMGTTAARKAFEILKNSRRIVATEIMAACQALDLKPENHELGKGTKVAYDLFRKEV 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_STRP1 (Histidine ammonia-lyase OS=Streptococcus pyogenes serotype M1 GN=hutH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKV 495
            DNP+I       + GGNF G P+    D   +AI+ IG +   +   LVN   +  LPS L   + P L+ GF   + A AS  SE + LA+P +     + ++ +D  S+G  ++RK  E +   + + +T ++A CQA+DL+     L    K       K+V
Sbjct:  312 DNPII-CKDGHVISGGNFHGEPMAQPFDFLGIAISEIGNVSERRVERLVNSQLSK-LPSFLV--KYPGLNSGFMITQYACASLASENKVLAHPASVDSIPSCENQEDFVSMGTTAARKAFEILKNSRRIVATEIMAACQALDLKPENHELGKGTKVAYDLFRKEV 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACC3 (Histidine ammonia-lyase OS=Bacillus cereus (strain 03BB102) GN=hutH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:  309 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSVEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 472          
The following BLAST results are available for this feature:
BLAST of FC876201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
HUTH_STRPZ3.791e-1130.91Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_BURS33.791e-1132.64Histidine ammonia-lyase OS=Burkholderia sp. (strai... [more]
HUTH_BURCH3.791e-1132.64Histidine ammonia-lyase OS=Burkholderia cenocepaci... [more]
HUTH_BURCC3.791e-1132.64Histidine ammonia-lyase OS=Burkholderia cenocepaci... [more]
HUTH_BURCA3.791e-1132.64Histidine ammonia-lyase OS=Burkholderia cenocepaci... [more]
HUTH2_FUSNN3.791e-1132.17Histidine ammonia-lyase 2 OS=Fusobacterium nucleat... [more]
HUTH_STRPG4.952e-1130.91Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_STRP64.952e-1130.91Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_STRP14.952e-1130.91Histidine ammonia-lyase OS=Streptococcus pyogenes ... [more]
HUTH_BACC34.952e-1129.76Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionC32001F04EF DevOvary1 Citrus clementina cDNA clone C32001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876201 ID=FC876201; Name=FC876201; organism=Citrus clementina; type=EST; length=701bp
GACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATGGTGGCAA
TTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCTA
TTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACTTGTCAAC
GATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCC
TAGCCTGGATTATGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATT
GTTCGGAGCTCCAATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGT
GCTGAACAGCACAACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAG
GAAGACTGCTGAAGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCT
TGGTAGCGCTTTGCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTG
AAGCATACAGTCAAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAAC
CGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATC
TGCTCAAAGCGGCTGATCGCGAACACGTCTTTGCATACATTGATGACCCC
TGCAGTGCTACCTATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGA
GCACGCACTGAAACATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCT
T
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