FC876201

Overview
NameFC876201
Unique NameFC876201
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:1285..1985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACAH (Histidine ammonia-lyase OS=Bacillus thuringiensis (strain Al Hakam) GN=hutH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.952e-11
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:  309 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSVEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACSU (Histidine ammonia-lyase OS=Bacillus subtilis GN=hutH PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 49/168 (29.17%), Postives = 84/168 (50.00%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI    +K + GGNF G PI  +MD  ++AI+ +  +   +   LVN   N+ LP  LS   +P L  G    + A AS  SE + LA+P +     +  + +D  S+G I++R   + +   + + +   +   QA++ R +E    +T K    ++ K V ++
Sbjct:  309 DNPLIFNDGDKVISGGNFHGQPIAFAMDFLKIAISELANIAERRIERLVNPQLND-LPPFLS--PHPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIAARHAYQVIANTRRVIAIEAICALQAVEYRGIEHAASYT-KQLFQEMRKVVPSI 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACHK (Histidine ammonia-lyase OS=Bacillus thuringiensis subsp. konkukian GN=hutH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:  309 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSIEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACCZ (Histidine ammonia-lyase OS=Bacillus cereus (strain ZK / E33L) GN=hutH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:  309 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSIEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACCR (Histidine ammonia-lyase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hutH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:  310 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSIEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 473          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACCQ (Histidine ammonia-lyase OS=Bacillus cereus (strain Q1) GN=hutH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:  309 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSIEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACCN (Histidine ammonia-lyase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=hutH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 47/148 (31.76%), Postives = 74/148 (50.00%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEE 444
            DNPLI     K + GGNF G PI  +MD  ++ +A I  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + +  ++   QA + R +EE
Sbjct:  309 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAEIANISERRIERLVNPQLND-LPPFLS--PKPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLAIEMICAMQAAEYRGIEE 453          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACC7 (Histidine ammonia-lyase OS=Bacillus cereus (strain AH187) GN=hutH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:  309 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSIEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 472          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACC4 (Histidine ammonia-lyase OS=Bacillus cereus (strain B4264) GN=hutH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:  310 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSIEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 473          
BLAST of FC876201 vs. ExPASy Swiss-Prot
Match: HUTH_BACC1 (Histidine ammonia-lyase OS=Bacillus cereus (strain ATCC 10987) GN=hutH PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 DNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 504
            DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:  309 DNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSIEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 472          
The following BLAST results are available for this feature:
BLAST of FC876201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
HUTH_BACAH4.952e-1129.76Histidine ammonia-lyase OS=Bacillus thuringiensis ... [more]
HUTH_BACSU6.467e-1129.17Histidine ammonia-lyase OS=Bacillus subtilis GN=hu... [more]
HUTH_BACHK6.467e-1129.76Histidine ammonia-lyase OS=Bacillus thuringiensis ... [more]
HUTH_BACCZ6.467e-1129.76Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACCR6.467e-1129.76Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACCQ6.467e-1129.76Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACCN6.467e-1131.76Histidine ammonia-lyase OS=Bacillus cereus subsp. ... [more]
HUTH_BACC76.467e-1129.76Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACC46.467e-1129.76Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_BACC16.467e-1129.76Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionC32001F04EF DevOvary1 Citrus clementina cDNA clone C32001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876201 ID=FC876201; Name=FC876201; organism=Citrus clementina; type=EST; length=701bp
GACAATCCCCTGATCGACGTTTCAAGGAACAAGGCCTTACATGGTGGCAA
TTTTCAGGGGACCCCAATTGGTGTCTCAATGGACAATACCCGTTTGGCTA
TTGCGGCAATAGGGAAGCTCATGTTTGCCCAATTTTCTGAACTTGTCAAC
GATTTTTACAACAATGGATTGCCGTCAAATCTGTCTGGTGGCAGGAATCC
TAGCCTGGATTATGGTTTCAAGGGCGCTGAAATTGCTATGGCTTCCTATT
GTTCGGAGCTCCAATTTCTTGCCAATCCTGTTACTAACCACGTCCAAAGT
GCTGAACAGCACAACCAAGATGTAAACTCCTTGGGATTGATCTCTTCCAG
GAAGACTGCTGAAGCAGTCGACATCCTGAAGCTCATGTCTTCCACATTCT
TGGTAGCGCTTTGCCAGGCTATTGATTTGAGACATTTGGAGGAAAATTTG
AAGCATACAGTCAAGAATACTGTCAGCCAAGTAGCTAAGAAAGTCTTAAC
CGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGATTCTGTGAGAAGGATC
TGCTCAAAGCGGCTGATCGCGAACACGTCTTTGCATACATTGATGACCCC
TGCAGTGCTACCTATCCATTGATGCAAAAGCTAAGGCAAGTACTTGTTGA
GCACGCACTGAAACATGGAGAGAACGAGAAGACTGCCAACTCTTCAATCT
T
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