FC876202
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 2.280e-103 Identity = 152/177 (85.88%), Postives = 168/177 (94.92%), Query Frame = 2
Query: 56 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 586
++EIR AQRA+GPA VLAIGT+TP +++ QADYPDYYFRITKSEH+TELKEKFKRMCDKSMIKKRYMYLTEEILKENPN+CA+MAPSLDARQDIVV EVPKL KEAA +AIKEWG PKS+ITHLIFCTTSG+DMPGADYQLT+L+GLRPSV RFM+YQQGCFAGGTVLRLAKDLAEN
Sbjct: 5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAEN 181 HSP 2 Score: 76.6406 bits (187), Expect = 2.280e-103 Identity = 36/40 (90.00%), Postives = 40/40 (100.00%), Query Frame = 1
Query: 592 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
GARVLVVCSEITAVTFRGP+++HLDSLVGQALFGDGAAA+
Sbjct: 184 GARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAI 223
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 2.280e-103 Identity = 152/177 (85.88%), Postives = 168/177 (94.92%), Query Frame = 2
Query: 56 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 586
++EIR AQRA+GPA VLAIGT+TP +++ QADYPDYYFRITKSEH+TELKEKFKRMCDKSMIKKRYMYLTEEILKENPN+CA+MAPSLDARQDIVV EVPKL KEAA +AIKEWG PKS+ITHLIFCTTSG+DMPGADYQLT+L+GLRPSV RFM+YQQGCFAGGTVLRLAKDLAEN
Sbjct: 5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAEN 181 HSP 2 Score: 76.6406 bits (187), Expect = 2.280e-103 Identity = 36/40 (90.00%), Postives = 40/40 (100.00%), Query Frame = 1
Query: 592 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
GARVLVVCSEITAVTFRGP+++HLDSLVGQALFGDGAAA+
Sbjct: 184 GARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAI 223
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 2.280e-103 Identity = 150/182 (82.42%), Postives = 168/182 (92.31%), Query Frame = 2
Query: 47 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 592
M +V EIR AQRA+GPAT++AIGTA P++ V Q+ YPD+YF+IT SEH ELKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAEN +
Sbjct: 1 MVSVSEIRQAQRAEGPATIMAIGTANPSNCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182 HSP 2 Score: 80.8777 bits (198), Expect = 2.280e-103 Identity = 38/42 (90.48%), Postives = 42/42 (100.00%), Query Frame = 1
Query: 586 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
+KGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGDGAAA+
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 222
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 2.280e-103 Identity = 152/182 (83.52%), Postives = 166/182 (91.21%), Query Frame = 2
Query: 47 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 592
M +V EIR AQRA+GPAT+LAIGTA P + V QA YPD+YF+IT SEH ELKEKF+RMCDKSMIK RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAEN +
Sbjct: 1 MVSVAEIRKAQRAEGPATILAIGTANPPNRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182 HSP 2 Score: 80.8777 bits (198), Expect = 2.280e-103 Identity = 38/42 (90.48%), Postives = 42/42 (100.00%), Query Frame = 1
Query: 586 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
+KGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGDGAAA+
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 222
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHS4_PEA (Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 2.974e-103 Identity = 151/182 (82.97%), Postives = 167/182 (91.76%), Query Frame = 2
Query: 47 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 592
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YFRIT SEH ELK+KF+RMCDKSMI +RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAEN +
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKIELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182 HSP 2 Score: 80.8777 bits (198), Expect = 2.974e-103 Identity = 38/42 (90.48%), Postives = 42/42 (100.00%), Query Frame = 1
Query: 586 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
+KGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGDGAAA+
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 222
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 2.974e-103 Identity = 151/182 (82.97%), Postives = 167/182 (91.76%), Query Frame = 2
Query: 47 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 592
M +V EIR QRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH T LKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAEN +
Sbjct: 1 MVSVSEIRKPQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182 HSP 2 Score: 80.8777 bits (198), Expect = 2.974e-103 Identity = 38/42 (90.48%), Postives = 42/42 (100.00%), Query Frame = 1
Query: 586 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
+KGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGDGAAA+
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 222
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 3.881e-103 Identity = 154/182 (84.62%), Postives = 166/182 (91.21%), Query Frame = 2
Query: 47 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 592
M TV E+R AQRA+GPAT+LAIGTATPA+ VNQ+ YPDYYFRIT SEH TELKEKF+RMCDKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA AIK WGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAEN +
Sbjct: 1 MVTVGEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKGWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182 HSP 2 Score: 77.0258 bits (188), Expect = 3.881e-103 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 1
Query: 586 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
+KGARVL+VCSEIT VTFRGP++ HLDSLVGQALFGDGAAAV
Sbjct: 181 NKGARVLIVCSEITVVTFRGPSEAHLDSLVGQALFGDGAAAV 222
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2) HSP 1 Score: 317.39 bits (812), Expect = 5.063e-103 Identity = 152/182 (83.52%), Postives = 165/182 (90.66%), Query Frame = 2
Query: 47 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 592
M TV+E R AQRA+GPAT+LAIGT+TP++ V+Q+ YPDYYFRIT SEH TELKEKFKRMCDKSMIKKRYM+LTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGK KAIKEWGQPKSKITHL+FCTTSGVDMP DYQL KL+ +RPSVKR MMYQQGCFAGGTVLRLAKDLAEN +
Sbjct: 1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKRGTQKAIKEWGQPKSKITHLVFCTTSGVDMPACDYQLAKLLPVRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182 HSP 2 Score: 78.9518 bits (193), Expect = 5.063e-103 Identity = 37/42 (88.10%), Postives = 42/42 (100.00%), Query Frame = 1
Query: 586 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
+KGARVLVVCSEITAVTFRGP+++HLDSLVGQALFGDGAAA+
Sbjct: 181 NKGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAI 222
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 6.606e-103 Identity = 152/180 (84.44%), Postives = 166/180 (92.22%), Query Frame = 2
Query: 53 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 592
+++EIR AQRADGPA +L IGTA P + V QA+YPDYYFRIT S+HMT+LKEKFKRMCDKSMI+KR+M+LTEE LKENP MCAYMAPSLD RQDIVVVEVPKLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAEN R
Sbjct: 4 SLEEIRKAQRADGPAGILGIGTANPPNHVLQAEYPDYYFRITNSDHMTDLKEKFKRMCDKSMIRKRHMHLTEEFLKENPKMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNR 183 HSP 2 Score: 77.7962 bits (190), Expect = 6.606e-103 Identity = 37/42 (88.10%), Postives = 41/42 (97.62%), Query Frame = 1
Query: 586 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
++GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF DGAAA+
Sbjct: 182 NRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAAL 223
BLAST of FC876202 vs. ExPASy Swiss-Prot
Match: CHSY_ARATH (Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 8.617e-103 Identity = 152/181 (83.98%), Postives = 167/181 (92.27%), Query Frame = 2
Query: 50 ATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENTR 592
+++ EIR AQRADGPA +LAIGTA P + V QA+YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KR+M+LTEE LKENP+MCAYMAPSLD RQDIVVVEVPKLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLR+AKDLAEN R
Sbjct: 7 SSLDEIRQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNR 187 HSP 2 Score: 77.7962 bits (190), Expect = 8.617e-103 Identity = 37/42 (88.10%), Postives = 41/42 (97.62%), Query Frame = 1
Query: 586 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 711
++GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF DGAAA+
Sbjct: 186 NRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAAL 227 The following BLAST results are available for this feature:
BLAST of FC876202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876202 ID=FC876202; Name=FC876202; organism=Citrus clementina; type=EST; length=712bpback to top |