FC876205

Overview
NameFC876205
Unique NameFC876205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB2_RALSO (L-aspartate oxidase 2 OS=Ralstonia solanacearum GN=nadB2 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.663e-46
Identity = 105/237 (44.30%), Postives = 139/237 (58.65%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGHS  R+ H  DMTGR I RAL   V   PN+     + A++LL+  DG      GV   ++   EV  F +   +LA+GG   +Y   TNP  + G+ +AMA RA A I N+EFVQFHPTA   EG  I          LITEAVRG+GG+LYN+  ERFMP Y  + ELAPRDVVAR+I  +++     +V LDI+H+ T  +  HFPN+      +G D+++  +P  PAAHY
Sbjct:  123 GGHSERRVAHVDDMTGRGIMRALQAKVAQLPNVIWIRQYEAVELLS--DGQ--AVSGVIAESLADGEVTVFSAPTVVLAAGGLTGLYQYATNPHASKGEAIAMAWRAGATIENLEFVQFHPTAFQIEGRVIS---------LITEAVRGEGGLLYNVANERFMPGYSSQQELAPRDVVARAIYSEMQAHGTSHVWLDITHQGTAFVEQHFPNLVEITRAHGCDLSQHRVPVSPAAHY 346          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_SYNY3 (L-aspartate oxidase OS=Synechocystis sp. (strain PCC 6803) GN=nadB PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.192e-44
Identity = 104/239 (43.51%), Postives = 139/239 (58.16%), Query Frame = 1
Query:    7 HSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQL----KKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            HS  R++HAAD TGR I   L+  V + PN+ +F    A+ L   ++     C G+     +T E   F S+  LLA+GG G ++  TTNP V+TGDG+A+A R+ A + ++EF QFHPTAL   G+P          FLI+EAVRG+G  L +   +RF   Y  R ELAPRDVV+R+I   L    K   +  V LD+S    E+I   FPNI   CL +G+DI R+PIP  PAAHY
Sbjct:  116 HSQPRVLHAADTTGRAIVSTLMGQVQARPNVEIFSQAIALSL--NIEPTTGHCRGIQVFVNQTIET--FHSRAVLLATGGGGQVFAQTTNPKVSTGDGIALAWRSGAQVRDLEFFQFHPTALTKPGVP---------HFLISEAVRGEGAHLLDRQGKRFAFDYHPRGELAPRDVVSRAIFQHLANTEKDPTQATVFLDLSPIEPERIQRRFPNIIRRCLHWGVDIFREPIPVAPAAHY 341          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_ANASP (L-aspartate oxidase OS=Anabaena sp. (strain PCC 7120) GN=nadB PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.239e-42
Identity = 100/239 (41.84%), Postives = 138/239 (57.74%), Query Frame = 1
Query:    7 HSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKR----NEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            HS +R++HAAD TGRE+   L + V+  PNI V +   A+ L   L+     C G+          VR  +   +LA+GG G ++  TTNP V+TGDG+A+A RA A++ ++EFVQFHPTAL   G          + FLI+EAVRG+G  L +    RF   Y    ELAPRDVV+R+I   L++        +V LD+   P +KI   FPNI   C ++G+D+ R+PIP  PAAHY
Sbjct:  139 HSRNRVLHAADTTGREVTTTLTDQVLRRPNIQVIQQALALSLW--LEPETGHCQGISLFYQGAITWVR--AGAVVLATGGGGQVFAQTTNPAVSTGDGVAIAWRAGAILRDLEFVQFHPTALTKPG---------ADRFLISEAVRGEGAHLVDNEGRRFAFDYHPAGELAPRDVVSRAIFSHLQRTAVDPATAHVWLDMRPIPEDKIRLRFPNIVKVCQRWGIDVFREPIPVAPAAHY 364          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_CLOAB (L-aspartate oxidase OS=Clostridium acetobutylicum GN=nadB PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.231e-42
Identity = 99/237 (41.77%), Postives = 133/237 (56.12%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            G HS +RIVH+ D TG+ +   L   V   PNI + E+    DL++     D +C G   L   T  +  F SK T+LASGG G ++ ++TN    T DG+AMA R    + ++ ++QFHPTAL D         T+E  FLI+E+VRG+GG L ++  ERF+       EL PRDVVA +I  + +K N KYV LDI+    + I   FP I  ECL  GLDIT+  IP  P  HY
Sbjct:  113 GAHSVNRIVHSTDETGKVVFETLYNEVKKRPNIEIIENIQVFDLISE----DNICFGASALKNNT--IYTFHSKATILASGGIGGLFKNSTNQRTLTADGIAMALRHNIDVRDLNYIQFHPTALYDSN-------TQEKKFLISESVRGEGGKLLSIENERFV------DELLPRDVVANAIYKEEEKDNSKYVYLDITSMDADFITKRFPGIYKECLSRGLDITKNKIPVTPVQHY 330          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: Y033_METJA (Uncharacterized FAD-dependent oxidoreductase MJ0033 OS=Methanocaldococcus jannaschii GN=MJ0033 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41
Identity = 97/240 (40.42%), Postives = 137/240 (57.08%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD-ERSELAPRDVVARSIDDQLKKRN--EKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GG S +R  +  D TG EI R L+E +     I + E   AI L+      D  C+G   L+++T  +    +K T+LA+GGAG +YP T+NP+  TGDG A+A+   A + +ME VQFHPT +   G+            L+TEAVRG+GGILYN   ERFM  YD ER EL+ RDVVAR+I  ++++       V LD+SH P E I      +  + L+ G+DI ++P+   P AH+
Sbjct:  112 GGQSFNRTCYCGDRTGHEIMRGLMEYISKFERIKILEEVMAIKLIVK----DNRCYGAIFLDLKTGNIFPIFAKATILATGGAGQLYPITSNPIQKTGDGFAIAYNEGAELIDMEMVQFHPTGMVGTGI------------LVTEAVRGEGGILYNKYKERFMVRYDKERMELSTRDVVARAIYKEIQEGRGVNGGVYLDVSHLPNEVIEKKLETMLKQFLRVGIDIRKEPMIVSPTAHH 335          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_STRCO (L-aspartate oxidase OS=Streptomyces coelicolor GN=nadB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36
Identity = 98/242 (40.50%), Postives = 136/242 (56.20%), Query Frame = 1
Query:    1 GGHSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNV----ETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGH   RI HA  D TG EI RAL+EAV +   +   E+   +DLLT  +G  A   GV TL+V    +   V    +   +LA+GG G ++ +TTNP V+TGDG+A+A RA A +S++EFVQFHPT L                 L++EAVRG+G  L +    RFM    E +ELAPRD+VA++I  ++++    ++ LD  H         FP I A C  +G+D   +P+P  PAAHY
Sbjct:  129 GGHHRRRIAHAGGDATGAEISRALVEAVRAR-GLRTVENALVLDLLTDAEGRTA---GV-TLHVMGEGQHDGVGAVHAPAVVLATGGMGQVFSATTNPSVSTGDGVALALRAGAEVSDLEFVQFHPTVL------FLGSDAEGQQPLVSEAVRGEGAHLVDADGVRFMQGRHELAELAPRDIVAKAITRRMQEHGADHMYLDARHFGRTMWEHRFPTILAACRAHGIDPVTEPVPVAPAAHY 359          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_CLOPE (L-aspartate oxidase OS=Clostridium perfringens GN=nadB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.929e-36
Identity = 88/237 (37.13%), Postives = 134/237 (56.54%), Query Frame = 1
Query:    1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            G H  +RIV+  D+TG+ +E  LLE V    NI + E    +D+    +     C G    N + Q++  + +KV +LA+GG G ++  +TN  + TGD + +A R    I ++ ++Q HPTA          KK+ E  FLI+E+VRG+GG L N   ERF+       EL PRD+V++ I +++KK N   V LD+S      + + FPNI  +CL+ G+DI+++PIP  PA HY
Sbjct:  112 GAHEINRIVYHKDITGKHVEDILLENVKRRKNIKIIEDCEMVDIYHRGNR----CIGA-LFNKDGQDLSIY-AKVVILATGGIGGLFKKSTNERIITGDSIGVAIRNNIEIKDLSYIQIHPTAFFS-------KKSEEKRFLISESVRGEGGKLLNCNGERFV------DELLPRDIVSKKIYEEMKKTNSNNVFLDVSFMEKSFLQNRFPNIYNKCLEEGIDISKEPIPVAPAQHY 329          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_MYCLE (L-aspartate oxidase OS=Mycobacterium leprae GN=nadB PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35
Identity = 98/238 (41.18%), Postives = 130/238 (54.62%), Query Frame = 1
Query:    1 GGHSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            GGHS  RIVHA  D TG E++RAL  A      + +   H A+ +L   DG   V +GV  LN     +V   S   +LASGG GH+Y +TTNP  +TGDG+A+A  A   +S++EF+QFHPT L   G     ++      L+TEA+RG+G IL +              +LAPRDVVA +ID +LK   +  V LD   R  +   S FP + A C   G+D  R+PIP  P AHY
Sbjct:  123 GGHSRRRIVHAGGDATGAEVQRALDHAA---DVLDIRTSHLALRVLH--DG--TVVNGVSVLNPNGWGIVSAPS--VILASGGLGHLYGATTNPEGSTGDGIALALWAGVAVSDLEFIQFHPTMLFAAGTGTGGRRP-----LVTEAIRGEGAILLDSKGNSVTSGVHPLGDLAPRDVVAAAIDARLKATGDSCVYLDA--RGIDGFASRFPTVTAACRTVGIDPAREPIPVVPGAHY 344          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_XYLFA (L-aspartate oxidase OS=Xylella fastidiosa GN=nadB PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 98/236 (41.53%), Postives = 134/236 (56.78%), Query Frame = 1
Query:    7 HSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            HS  RIVH   D +G  I +AL   V++DP+I+V E   A  +L      D V  G+   N  T E+V   S++ LLA+GG G +Y +TTNP+   G G+AMA RA AV+++MEFVQFHPTAL     P+          L++EAVRG+G +L N   ERFM      +ELA R++VA++I  ++ +  +  V LD       +  + FP I A C K G+D    PIP  PAAHY
Sbjct:  121 HSRRRIVHVGGDRSGTAIVQALTACVLNDPSITVLEGLEARHILMA----DNVVCGLLLAN-PTSEIVLPSSRI-LLATGGIGGLYDATTNPVSNFGQGIAMAARAGAVLADMEFVQFHPTALHCHNRPLA---------LVSEAVRGEGAVLINERGERFMADI-PGAELAARNIVAQAISAEITRGGQ--VFLDARQALGARFSTRFPTITALCHKVGIDPVHMPIPVCPAAHY 338          
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_XYLFT (L-aspartate oxidase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=nadB PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.597e-33
Identity = 98/236 (41.53%), Postives = 134/236 (56.78%), Query Frame = 1
Query:    7 HSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711
            HS  RIVH   D +G  I +AL   V++DP+I+V E   A  +L      D V  G+   N  T E+V   S++ LLA+GG G +Y +TTNP+   G G+AMA RA AV+++MEFVQFHPTAL     P+          L++EAVRG+G +L N   ERFM      +ELA R++VA++I  ++ +  +  V LD       +  + FP I A C K G+D    PIP  PAAHY
Sbjct:  121 HSRRRIVHVGGDRSGTAIVQALTACVLNDPSITVLEGLEARHILMA----DNVVCGLLLAN-PTSEIVLPSSRI-LLATGGIGGLYDATTNPVNNFGQGIAMAARAGAVLADMEFVQFHPTALHCHNRPLA---------LVSEAVRGEGAVLINERGERFMADI-PGAELAARNIVAQAISAEITRGGQ--VFLDARQALGARFSTRFPTITALCHKVGIDPVHMPIPVCPAAHY 338          
The following BLAST results are available for this feature:
BLAST of FC876205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
NADB2_RALSO1.663e-4644.30L-aspartate oxidase 2 OS=Ralstonia solanacearum GN... [more]
NADB_SYNY31.192e-4443.51L-aspartate oxidase OS=Synechocystis sp. (strain P... [more]
NADB_ANASP4.239e-4241.84L-aspartate oxidase OS=Anabaena sp. (strain PCC 71... [more]
NADB_CLOAB7.231e-4241.77L-aspartate oxidase OS=Clostridium acetobutylicum ... [more]
Y033_METJA3.589e-4140.42Uncharacterized FAD-dependent oxidoreductase MJ003... [more]
NADB_STRCO1.195e-3640.50L-aspartate oxidase OS=Streptomyces coelicolor GN=... [more]
NADB_CLOPE5.929e-3637.13L-aspartate oxidase OS=Clostridium perfringens GN=... [more]
NADB_MYCLE5.019e-3541.18L-aspartate oxidase OS=Mycobacterium leprae GN=nad... [more]
NADB_XYLFA2.754e-3341.53L-aspartate oxidase OS=Xylella fastidiosa GN=nadB ... [more]
NADB_XYLFT3.597e-3341.53L-aspartate oxidase OS=Xylella fastidiosa (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC32001F10EF DevOvary1 Citrus clementina cDNA clone C32001F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876205 ID=FC876205; Name=FC876205; organism=Citrus clementina; type=EST; length=712bp
GGGGGACACTCCCATCACAGAATCGTCCATGCTGCAGATATGACTGGAAG
GGAGATCGAGCGGGCTCTTTTGGAAGCTGTTGTCAGTGACCCTAATATCT
CAGTGTTCGAGCATCACTTTGCGATAGATTTGCTAACTACTCTGGATGGT
CCTGATGCAGTTTGTCACGGTGTTGACACTTTAAATGTTGAAACACAAGA
GGTGGTACGATTCATTTCAAAGGTGACCTTACTTGCATCAGGTGGAGCTG
GGCATATTTATCCATCGACAACAAATCCTCTGGTGGCCACTGGAGATGGG
ATGGCTATGGCCCACCGAGCTCAAGCAGTGATTTCAAACATGGAATTTGT
GCAGTTCCACCCAACTGCCTTAGCTGATGAGGGCCTTCCCATCAAACCAA
AGAAAACTCGAGAGAATTCATTTCTCATCACTGAAGCTGTCAGGGGTGAT
GGAGGCATCCTTTACAATTTAGGCATGGAACGGTTCATGCCCCTGTATGA
TGAGAGATCTGAGCTTGCTCCTAGGGATGTGGTGGCAAGAAGTATAGATG
ACCAGCTTAAAAAGCGTAATGAGAAGTATGTGCTCCTTGATATAAGTCAC
AGGCCCACGGAAAAAATACTGTCCCACTTTCCCAACATAGCTGCTGAATG
CCTTAAGTATGGACTGGACATAACCCGCCAGCCAATTCCCTGTGGTCCTG
CTGCACATTACA
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