FC876205
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_MYCTU (L-aspartate oxidase OS=Mycobacterium tuberculosis GN=nadB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.785e-32 Identity = 98/240 (40.83%), Postives = 128/240 (53.33%), Query Frame = 1 Query: 1 GGHSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVT-LLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTAL-ADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 GGHS RIVHA D TG E++RAL +A + + H A+ +L DG V L V + IS + +LA+GG GH+Y +TTNP +TGDG+A+ A +S++EF+QFHPT L A +P LITEA+RG+G IL + +LAPRDVVA +ID +LK + V LD R E S FP + A C G+D RQPIP P AHY Sbjct: 122 GGHSRRRIVHAGGDATGAEVQRALQDAAGM---LDIRTGHVALRVLH--DGT-----AVTGLLVVRPDGCGIISAPSVILATGGLGHLYSATTNPAGSTGDGIALGLWAGVAVSDLEFIQFHPTMLFAGRAGGRRP--------LITEAIRGEGAILVDRQGNSITAGVHPMGDLAPRDVVAAAIDARLKATGDPCVYLDA--RGIEGFASRFPTVTASCRAAGIDPVRQPIPVVPGAHY 341
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_MYCBO (L-aspartate oxidase OS=Mycobacterium bovis GN=nadB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.785e-32 Identity = 98/240 (40.83%), Postives = 128/240 (53.33%), Query Frame = 1 Query: 1 GGHSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVT-LLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTAL-ADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 GGHS RIVHA D TG E++RAL +A + + H A+ +L DG V L V + IS + +LA+GG GH+Y +TTNP +TGDG+A+ A +S++EF+QFHPT L A +P LITEA+RG+G IL + +LAPRDVVA +ID +LK + V LD R E S FP + A C G+D RQPIP P AHY Sbjct: 122 GGHSRRRIVHAGGDATGAEVQRALQDAAGM---LDIRTGHVALRVLH--DGT-----AVTGLLVVRPDGCGIISAPSVILATGGLGHLYSATTNPAGSTGDGIALGLWAGVAVSDLEFIQFHPTMLFAGRAGGRRP--------LITEAIRGEGAILVDRQGNSITAGVHPMGDLAPRDVVAAAIDARLKATGDPCVYLDA--RGIEGFASRFPTVTASCRAAGIDPVRQPIPVVPGAHY 341
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_RHIME (L-aspartate oxidase OS=Rhizobium meliloti GN=nadB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32 Identity = 92/236 (38.98%), Postives = 123/236 (52.12%), Query Frame = 1 Query: 7 HSHHRIVHA-ADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 HS RIV DM G+ I AL+ AV + P+I V E + +L+ V D +++ V F ++ +L SGG GH+Y TTNP A G G+ MA RA A+I++ EFVQFHPTA+ D G P L TEA+RGDG L N RFM ELAPRD+V+R + +++ + LD + FP + A C+ G+D RQPIP PA HY Sbjct: 126 HSERRIVRVKGDMAGKSIMEALIAAVRNTPSIRVIEGYVVEELVREGRFISGVIARPDA--GQSKSRVSFPARAVVLCSGGVGHLYAVTTNPWEACGQGVGMAARAGAIIADPEFVQFHPTAI-DIGKDPAP--------LATEALRGDGATLINSEGRRFMLDIHPDGELAPRDIVSRGVFAEVQAGRGAF--LDCTKAVGRHFPEMFPTVYASCMAAGIDPVRQPIPVTPAVHY 348
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA1_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH1-1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.977e-32 Identity = 91/243 (37.45%), Postives = 126/243 (51.85%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G +R AAD TG + L + N F +FA+DLL DG C GV LN+E + RF S T+LA+GG G Y S T+ TGDG AM RA + ++EFVQFHPT + G LITE RG+GGIL N ERFM Y +LA RDVV+RS+ ++++ ++ ++ L ++H P E + P I+ + G+D+T++PIP P HY Sbjct: 171 GGQAYRCACAADRTGHALLHTLYGQAMKH-NTQFFVEYFALDLLMASDGS---CQGVIALNMEDGTLHRFRSSQTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGC------------LITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHY 397
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA2_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH1-2 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.157e-31 Identity = 90/243 (37.04%), Postives = 126/243 (51.85%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERS-ELAPRDVVARSIDDQLKKRN-----EKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G +R AAD TG + L + N F +FA+DL+ DG C GV LN+E + RF + T+LA+GG G Y S T+ TGDG AM RA + ++EFVQFHPT + G LITE RG+GGIL N E+FM Y + +LA RDVV+RS+ ++++ + Y+ L ++H P E + P I+ + G+D+TR+PIP P HY Sbjct: 169 GGQAYRCACAADRTGHALLHTLYGQAMKH-NTQFFVEYFALDLIMNSDG---TCQGVIALNMEDGTLHRFHAGSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGC------------LITEGARGEGGILRNSEGEKFMDRYAPTARDLASRDVVSRSMTMEIRQGRGAGPMKDYLYLYLNHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLPTVHY 395
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_ORYSJ (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.279e-30 Identity = 88/243 (36.21%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKKRN-----EKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G +R AAD TG + L + N F +FA+DL+ +G C GV LN+E + RF + T+LA+GG G Y S T+ TGDG AM RA + ++EFVQFHPT + G LITE RG+GGIL N ERFM Y +LA RDVV+RS+ ++++ + ++ L ++H P E + P I+ + G+D+T++PIP P HY Sbjct: 167 GGQAYRCACAADRTGHAMLHTLYGQAMKH-NTQFFVEYFALDLIMDSEG---TCQGVIALNMEDGTLHRFRATNTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGC------------LITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHY 393
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_CAEEL (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Caenorhabditis elegans GN=sdha-1 PE=2 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.279e-30 Identity = 88/243 (36.21%), Postives = 127/243 (52.26%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G HR AD TG + L A + N + F +FA+DL+ + VC GV +++E + RF SK T+LA+GG G + S T+ TGDG A+ RA S+MEFVQFHPT + G LITE RG+GG L N ERFM Y +LA RDVV+RS+ ++ + ++ ++ L + H P E++ P I+ + + G+D+T++PIP P HY Sbjct: 164 GGQAHRTCCVADRTGHSLLHTLYGASLQY-NCNYFVEYFALDLIME----NGVCVGVIAMDLEDGTIHRFRSKNTVLATGGYGRAFFSCTSAHTCTGDGTALTARAGINNSDMEFVQFHPTGIYGAGC------------LITEGSRGEGGYLVNSAGERFMERYAPNAKDLASRDVVSRSMTVEIMEGRGVGPDKDHIYLQLHHLPAEQLQQRLPGISETAMIFAGVDVTKEPIPVIPTVHY 389
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_BACSU (L-aspartate oxidase OS=Bacillus subtilis GN=nadB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.671e-30 Identity = 89/238 (37.39%), Postives = 128/238 (53.78%), Query Frame = 1 Query: 1 GGHSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 G HS++RI HA D TGR + LL+ + S I + E+ A DLL D C GV T + + + VR +V +LA+GG G+++ TN L TGDG+++A+RA A ++++EF QFHPT L G+ + L++EAVRG+GG L + R M +LAPRD+V+R I +++ K N Y I + FP I A C K G+DI IP P H+ Sbjct: 113 GAHSYNRIFHAGGDATGRLLIDYLLKRINS--KIKLIENETAADLLIE----DGRCIGVMTKDSKGRLKVRHADEV-VLAAGGCGNLFLHHTNDLTVTGDGLSLAYRAGAELTDLEFTQFHPTLLVKNGV---------SYGLVSEAVRGEGGCLVDENGRRIMAERHPLGDLAPRDIVSRVIHEEMAKGNRVY----IDFSAISDFETRFPTITAICEKAGIDIHSGKIPVAPGMHF 330
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_AGRT5 (L-aspartate oxidase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=nadB PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.671e-30 Identity = 91/236 (38.56%), Postives = 129/236 (54.66%), Query Frame = 1 Query: 7 HSHHRIVHA-ADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 HS RI+HA D +G I RAL +AV P+I+V E LLT D+V G+ ++ + +LA+GG G +Y +TTNP G G+ +A RA A++++MEFVQFHPTAL+ P+ L++EAVRG+G +L N ERFM +ELA RD+VAR+ID ++ + + V LD S FP+I C + G+D R+ +P PA HY Sbjct: 120 HSRRRILHAEGDGSGAAIVRALTDAVRRTPSITVLEGTEVRRLLTE----DSVIAGLACAGPNGSFLLP--ASQVILATGGLGGLYDATTNPSGNFGQGIMLAARAGAILADMEFVQFHPTALSSPRRPLA---------LVSEAVRGEGALLLNENGERFMAAV-PGAELASRDIVARAIDREILRGGQ--VFLDARQALGSGFASRFPSIDLLCREAGIDPARELVPVRPAVHY 337
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_RHILO (L-aspartate oxidase OS=Rhizobium loti GN=nadB PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.850e-30 Identity = 97/239 (40.59%), Postives = 130/239 (54.39%), Query Frame = 1 Query: 7 HSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLT---TLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 HS RIVHAA D TGRE+ RALL +I++ E A+ L+ ++ G V HG + T+ VV LA+GG G ++ TTNPL + G G+A+A A A ++++EFVQFHPTAL P+ L++EAVRG+G +L + R + +ELA RDVVAR+I DQL + Y LD H +K FP I A C G+D +PIP PAAHY Sbjct: 121 HSRRRIVHAAGDATGRELFRALLGVARRTRSITIMEGMTALRLVVAEGSIVGLLTVLHGA-VFALPTRRVV--------LATGGIGGLFCDTTNPLSSFGHGLALAACAGAELADLEFVQFHPTALDIARRPMP---------LVSEAVRGEGAVLIDEHGHRLL-ADTPGAELASRDVVARAISDQLAAGHGVY--LDARHCLGQKFARRFPAIDAICKHAGIDPAVEPIPVRPAAHY 338 The following BLAST results are available for this feature:
BLAST of FC876205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876205 ID=FC876205; Name=FC876205; organism=Citrus clementina; type=EST; length=712bpback to top |