FC876205
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_RAT (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus GN=Sdha PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.414e-29 Identity = 87/243 (35.80%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G HR AD TG + L + + S F +FA+DLL + C GV L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFHPT + G LITE RG+GGIL N ERFM Y +LA RDVV+RS+ ++++ + +V L + H P E++ + P I+ + + G+D+T++PIP P HY Sbjct: 175 GGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIALCIEDGSIHRIRAKNTIIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHY 400
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_MOUSE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Mus musculus GN=Sdha PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.847e-29 Identity = 87/243 (35.80%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G HR AD TG + L + + S F +FA+DLL + C GV L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFHPT + G LITE RG+GGIL N ERFM Y +LA RDVV+RS+ ++++ + +V L + H P E++ + P I+ + + G+D+T++PIP P HY Sbjct: 183 GGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIALCIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHY 408
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_SCHPO (Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Schizosaccharomyces pombe GN=sdh1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 86/243 (35.39%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G +R AD TG I L + N + F +FA+DL+ ++G + C GV +N+E + RF + T+LA+GG G Y S T+ TGDG AM RA + ++EFVQFHPT + G LITE RG+GG L N ERFM Y +LA RDVV+R++ ++++ + + L +SH P E + P I+ + G+D+T++PIP P HY Sbjct: 176 GGQAYRCAAVADRTGHSILHTLYGQSLKH-NTNFFIEYFAMDLI--MEGGE--CRGVIAMNLEDGSIHRFRAHKTILATGGYGRAYFSCTSAHTCTGDGNAMVSRAGLPLQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGYLLNSKGERFMERYAPTAKDLASRDVVSRAMTVEIREGRGVGPEKDHCYLQLSHLPAEILKERLPGISETAAIFAGVDVTKEPIPVLPTVHY 401
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_PONAB (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Pongo abelii GN=SDHA PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 87/243 (35.80%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G HR AD TG + L + + S F +FA+DLL + C GV L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFHPT + G LITE RG+GGIL N ERFM Y +LA RDVV+RS+ ++++ + +V L + H P E++ + P I+ + + G+D+T++PIP P HY Sbjct: 183 GGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHY 408
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_HUMAN (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Homo sapiens GN=SDHA PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29 Identity = 87/243 (35.80%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G HR AD TG + L + + S F +FA+DLL + C GV L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFHPT + G LITE RG+GGIL N ERFM Y +LA RDVV+RS+ ++++ + +V L + H P E++ + P I+ + + G+D+T++PIP P HY Sbjct: 183 GGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHY 408
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_MACFA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Macaca fascicularis GN=SDHA PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29 Identity = 87/243 (35.80%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G HR AD TG + L + + S F +FA+DLL + C GV L +E + R +K T++A+GG G Y S T+ +TGDG AM RA ++EFVQFHPT + G LITE RG+GGIL N ERFM Y +LA RDVV+RS+ ++++ + +V L + H P E++ + P I+ + + G+D+T++PIP P HY Sbjct: 183 GGQAHRCCCVADRTGHSLLHTLYGRSLRY-DTSYFVEYFALDLLME----NRECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHY 408
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_HALSA (L-aspartate oxidase OS=Halobacterium salinarium GN=nadB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29 Identity = 90/239 (37.66%), Postives = 123/239 (51.46%), Query Frame = 1 Query: 7 HSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVET----QEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 HS RI+H TG I L + + N+ + E A+DL+T AV + N T + V + T+LA+GG G +Y +TNP +TGDG+AMA A A +++ E+VQFHPTA D + FL++EAVRG+G +L N ERFMP Y E +ELAPRDVVAR++ + E V LD+S FP +A C G+D IP P H+ Sbjct: 117 HSAARILHVDAATGHHILGPFLRHLDAHENVDMLEDAAALDLITD---EGAVTGALLDRNPRTGDRAETGVPVFAGSTVLATGGIGDLYRRSTNPRGSTGDGVAMAALAGADVTDAEYVQFHPTAYDD-----------ADPFLVSEAVRGEGALLRNADGERFMPDYHEDAELAPRDVVARAVAAERDATGE--VRLDVS---PLAFAEEFPGLAEACADRGVD-WETGIPVAPCEHF 335
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSX_YEAST (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Saccharomyces cerevisiae GN=YJL045W PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29 Identity = 86/243 (35.39%), Postives = 123/243 (50.62%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G +R AD TG + L + + N F +FA+DLLT + GV N E + RF + T++A+GG G Y S T+ TGDG AM RA + ++EFVQFHP+ + G LITE RG+GG L N ERFM Y +LA RDVV+R+I +++ +N+ ++LL +SH P E + P I+ + G+D+T++PIP P HY Sbjct: 168 GGQAYRTCAVADRTGHAMLHTLYGQALKN-NTHFFIEYFAMDLLTH----NGEVVGVIAYNQEDGTIHRFRAHKTVIATGGYGRAYFSCTSAHTCTGDGNAMVSRAGFPLEDLEFVQFHPSGIYGSGC------------LITEGARGEGGFLLNSEGERFMERYAPTAKDLASRDVVSRAITMEIRAGRGVGKNKDHILLQLSHLPPEVLKERLPGISETAAVFAGVDVTQEPIPVLPTVHY 393
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_DROME (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Drosophila melanogaster GN=Scs-fp PE=2 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 9.168e-29 Identity = 86/243 (35.39%), Postives = 123/243 (50.62%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G HR AD TG + L +S + + F +FA+DL+ D C GV LN+E + RF +K T++A+GG G + S T+ TGDG AM R ++EFVQFHPT + G LITE RG+GG L N ERFM Y +LA RDVV+RS+ ++ + + +V L + H P +++ P I+ + + G+D+TR+PIP P HY Sbjct: 180 GGQAHRCCAVADRTGHSLLHTLYGQSLSY-DCNYFVEYFALDLIFE----DGECRGVLALNLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGAGC------------LITEGCRGEGGYLINGNGERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPIPVLPTVHY 405
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_DICDI (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Dictyostelium discoideum GN=sdhA PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.197e-28 Identity = 87/238 (36.55%), Postives = 121/238 (50.84%), Query Frame = 1 Query: 19 RIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 R AAD TG + L V N F +F DL+ ++ D C GV +N+E + RF S T++A+GG G Y S T+ TGDG AM RA ++EFVQFHPT + G LITE RG+GG L N ERFMP Y ++LA RDVV+RS ++++ + + LL+++H E I P I + + G+D+T++PIP P HY Sbjct: 166 RCCAAADRTGHALLHTLYGQAVKH-NTKFFIEYFVTDLI--MENGD--CRGVVAINLEDGTIHRFRSHATVIATGGYGRAYFSATSAHTCTGDGNAMVIRAGLPCQDLEFVQFHPTGIYGSGC------------LITEGARGEGGYLLNSSGERFMPRYAPSVADLASRDVVSRSETMEIREGRGVGPEKDHCLLNLTHLSPEIIDERLPGIRETAMIFAGVDVTKEPIPVIPTVHY 386 The following BLAST results are available for this feature:
BLAST of FC876205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876205 ID=FC876205; Name=FC876205; organism=Citrus clementina; type=EST; length=712bpback to top |