FC876205
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_RICTY (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia typhi GN=sdhA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26 Identity = 84/243 (34.57%), Postives = 118/243 (48.56%), Query Frame = 1 Query: 4 GHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY-DERSELAPRDVVARSIDDQLKK-----RNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 G + R AAD TG I L + + + F +FAIDLL D C GV N++ + F + +LA+GG G Y S T+ TGDG M RA + +MEFVQFHPT + G LITE RG+GG L N ERFM Y +LA RDVV+R++ ++++ + +V L ++H E + P I+ + G+D+T+ PIP P HY Sbjct: 133 GKAAQRTCAAADRTGHAILHTLYQQSLKH-KVQFFIEYFAIDLLME----DGECRGVVAWNLDDGSLHCFRAHNVVLATGGYGRAYFSATSAHTCTGDGGGMVIRAGLPLQDMEFVQFHPTGIYSAGC------------LITEGARGEGGYLVNANGERFMERYAPAAKDLASRDVVSRAMTIEIREGRGVGEYKDHVFLHLNHLSPEILHRRLPGISETAKIFAGVDVTKDPIPVLPTVHY 358
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_SULTO (L-aspartate oxidase OS=Sulfolobus tokodaii GN=nadB PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.259e-26 Identity = 82/237 (34.60%), Postives = 130/237 (54.85%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 GGH+ R++H D TGREI LL+ + + I + E D L + D G T E + +V + K+ +LA+GG ++Y ++ GDGMA+A +A ++++MEFVQFHPT + +G FL+TE +RG+G + N ERF+ YD+R ELAPRD+++R+I ++ K ++ V +D+S E FP +A ++G + + IP PAAH+ Sbjct: 103 GGHTKRRVLHRTDETGREIFNFLLK-LAREEGIPIIE-----DRLVEIRVKDGKVTGFVT---EKRGLVEDVDKL-VLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDG----------EVFLLTETLRGEGAQIINENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK--VFIDLS--KIEDFERKFPVVAKYLARHGHNY-KVKIPIFPAAHF 314
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: FRDA_PROVU (Fumarate reductase flavoprotein subunit OS=Proteus vulgaris GN=frdA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.265e-26 Identity = 81/256 (31.64%), Postives = 118/256 (46.09%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY------------DERSELAPRDVVARSIDDQ------LKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 GG R AAD TG + L + + P I F+ HF +D+L + GV +N+ V+ + ++A+GGAG +Y TN + TGDGM +A R + +MEFVQ+HPT L G+ L+TE RG+GGIL N R++ Y ++ EL PRD V+++ + +K V LD+ H +K+ P I Y G+D +PIP P AHY Sbjct: 118 GGMKIERTWFAADKTGFHMLHTLFQTSLKYPQIQRFDEHFVLDILVD----EGHARGVVAINMMEGTKVQIRANAVIMATGGAGRVYRFNTNGGIVTGDGMGIALRHGVPLRDMEFVQYHPTGLPGSGI------------LMTEGCRGEGGILVNKDGYRYLQDYGLGPETPLGKPENKYMELGPRDKVSQAFWHEWRAGRTIKTHRGDVVHLDLRHLGAKKLHERLPFICELAKAYVGVDPVNEPIPVRPTAHY 357
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_CAUCR (L-aspartate oxidase OS=Caulobacter crescentus GN=nadB PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.488e-26 Identity = 88/237 (37.13%), Postives = 119/237 (50.21%), Query Frame = 1 Query: 7 HSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDA-VCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 HS R+ D G I A++ AV + P I V E+ A LL +G V VD VE + S +LA+GG G +Y TT P G+G+ +A A A+I++ EFVQFHPTA+ D G R+ + L TEA+RG+G IL N + FM Y ELAPRDVVAR++ ++ + LD + FP + C+ G+D RQ IP PA HY Sbjct: 123 HSAARVARVGGDGAGAAIMAAVIAAVRATPGIEVRENARARRLLQDANGRVVGVLADVDGALVEIR------STAVILATGGVGGLYAVTTTPAQVRGEGLGLAALAGAMIADPEFVQFHPTAI-DIG--------RDPAPLATEALRGEGAILRNADGKAFMADYHPAKELAPRDVVARAL--HAERAAGRGAFLDATAAVGAHFPHEFPAVFEACMSAGIDPRRQMIPVTPAVHY 342
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: FRDA_WOLSU (Fumarate reductase flavoprotein subunit OS=Wolinella succinogenes GN=frdA PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.370e-24 Identity = 82/246 (33.33%), Postives = 127/246 (51.63%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMA-HRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD-ERSELAPRDVVARSIDDQLKKRN------EKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 GG R + AD TG + A+ + +S+ + AI L+ D C+G ++ T +++ +++K TL+A+GG G IY +TTN +V G G A+A A + NME VQFHPT L G+ L+TE RGDGGIL ++ RFMP Y+ E+ ELA RDVV+R + + ++K +++ LDIS + I ++ ++ C + G+D + P P HY Sbjct: 142 GGTKKWRTCYTADATGHTMLFAVANECLK-LGVSIQDRKEAIALIHQ----DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIALETGIAQLGNMEAVQFHPTPLFPSGI------------LLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKGVQSPYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHY 370
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: FRDA_HAEIN (Fumarate reductase flavoprotein subunit OS=Haemophilus influenzae GN=frdA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 77/257 (29.96%), Postives = 118/257 (45.91%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLY------------DERSELAPRDVVARSIDDQLKKRNE-------KYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 GG R AAD TG + L + + P I F+ HF +D+L D G+ +N+ +V+ + ++A+GG + TN + TGDG++MA+R + +MEFVQ+HPT L + G+ L+TE RG+GGIL N R++ Y ++ EL PRD V+++ + KK N V LD+ H + + P I Y G++ +PIP P HY Sbjct: 118 GGMKIERTWFAADKTGFHLLHTLFQTSIQYPQIQRFDEHFVLDILVD----DGHARGMVAMNMMEGSLVQINANAVVIATGGGCRAFKFNTNGGIVTGDGLSMAYRHGVPLRDMEFVQYHPTGLPNTGI------------LMTEGCRGEGGILVNKDGYRYLQDYGLGPETPIGKPQNKYMELGPRDKVSQAFWQEWKKGNTLKTAKGVDVVHLDLRHLGEKYLHERLPFICELASAYEGVNPVNEPIPVRPVVHY 358
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: FRDA_MYCTU (Fumarate reductase flavoprotein subunit OS=Mycobacterium tuberculosis GN=frdA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23 Identity = 79/254 (31.10%), Postives = 119/254 (46.85%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD----------ERSELAPRDVVARSIDDQLKKRNE------KYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 GG R AAD TG + L + +++ ++ ++ FA LL DG VC G+ + + T + ++ +L +GG G ++P TTN + TGDGMA+A RA A + +MEFVQ+HPT L G+ LITEA R +GG L N R++ YD EL PRD ++++ + K V LD+ H + I + P + C Y +D + +P P HY Sbjct: 117 GGMKKLRTWFAADKTGFHLLHTLFQRLLTYSDVMRYDEWFATTLLVD-DG--RVC-GLVAIELATGRIETILADAVILCTGGCGRVFPFTTNANIKTGDGMALAFRAGAPLKDMEFVQYHPTGLPFTGI------------LITEAARAEGGWLLNKDGYRYLQDYDLGKPTPEPRLRSMELGPRDRLSQAFVHEHNKGRTVDTPYGPVVYLDLRHLGADLIDAKLPFVRELCRDYQHIDPVVELVPVRPVVHY 354
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: FRDA_MYCBO (Fumarate reductase flavoprotein subunit OS=Mycobacterium bovis GN=frdA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23 Identity = 79/254 (31.10%), Postives = 119/254 (46.85%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD----------ERSELAPRDVVARSIDDQLKKRNE------KYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 GG R AAD TG + L + +++ ++ ++ FA LL DG VC G+ + + T + ++ +L +GG G ++P TTN + TGDGMA+A RA A + +MEFVQ+HPT L G+ LITEA R +GG L N R++ YD EL PRD ++++ + K V LD+ H + I + P + C Y +D + +P P HY Sbjct: 117 GGMKKLRTWFAADKTGFHLLHTLFQRLLTYSDVMRYDEWFATTLLVD-DG--RVC-GLVAIELATGRIETILADAVILCTGGCGRVFPFTTNANIKTGDGMALAFRAGAPLKDMEFVQYHPTGLPFTGI------------LITEAARAEGGWLLNKDGYRYLQDYDLGKPTPEPRLRSMELGPRDRLSQAFVHEHNKGRTVDTPYGPVVYLDLRHLGADLIDAKLPFVRELCRDYQHIDPVVELVPVRPVVHY 354
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_LISIN (L-aspartate oxidase OS=Listeria innocua GN=nadB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22 Identity = 79/239 (33.05%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 1 GGHSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITR-QPIPCGPAAHY 711 G H RI+H+ D TG+ + L E + ++ E AI+++ D GV L+ E Q + + + +LASGG G ++P TTN +GDG+A+A+RA A +S+MEF+QFHPT L G LI+EAVRG+G L M ++LAPRDVVA ++ +++++ N+ V LDI+ FP I ++ + + IP P AH+ Sbjct: 112 GAHQLPRILHSGGDQTGKFLTTFLQEKLTK---VNWQEQKMAIEIIKH----DGRAIGVHCLDKENQ-LHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRADATLSDMEFIQFHPTLLFLNG---------RCHGLISEAVRGEGATLIRADGSAIMETVHPLADLAPRDVVAATLFEEIERGNQ--VFLDIT--KVAHFEKRFPAITTSLDEHQVPFRETKRIPVHPGAHF 329
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_LISMO (L-aspartate oxidase OS=Listeria monocytogenes GN=nadB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.873e-22 Identity = 81/239 (33.89%), Postives = 120/239 (50.21%), Query Frame = 1 Query: 1 GGHSHHRIVHAA-DMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITR-QPIPCGPAAHY 711 G H RI+H D TG+ + L E + +I E AI+++ D V H +D N + + + +LASGG G ++P TTN +GDG+A+A+RA A +++MEF+QFHPT L G LI+EAVRG+G L M R++LAPRD+VA ++ +++ NE V LDI+ P + FP I A + + + IP P AH+ Sbjct: 112 GAHQLPRILHTGGDQTGKFLTTFLQEKLT---DIHWQEQKMAIEIIKQNDSAIGV-HCLDKEN----RLHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDMEFIQFHPTLLFLNG---------RCHGLISEAVRGEGAKLIRADGSAIMTDVHPRADLAPRDIVAATLFAEIQDGNE--VFLDITAIPNFE--KRFPGITANLDAHHIPFRETKRIPVHPGAHF 329 The following BLAST results are available for this feature:
BLAST of FC876205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876205 ID=FC876205; Name=FC876205; organism=Citrus clementina; type=EST; length=712bpback to top |