FC876205
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: FRDA_HELPY (Fumarate reductase flavoprotein subunit OS=Helicobacter pylori GN=frdA PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.364e-22 Identity = 72/190 (37.89%), Postives = 99/190 (52.11%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMA-HRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD-ERSELAPRDVVARSIDDQLKK 564 GG R AD TG +L AV ++ + D+L + D C+G ++ T E+ ++SK TLLA+GG G +Y TTN ++ G G A A A + NME VQFHPTAL G+ L+TE RGDGG+L + RFMP Y+ E+ ELA RDVV+R I + ++K Sbjct: 142 GGTKKWRTCFTADATGH----TMLYAVANEALHHKVDIQDRKDMLAFIHH-DNKCYGAVVRDLITGEISAYVSKGTLLATGGYGRVYKHTTNAVICDGAGAASALETGVAKLGNMEAVQFHPTALVPSGI------------LMTEGCRGDGGVLRDKFGRRFMPAYEPEKKELASRDVVSRRILEHIQK 314
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: FRDA_HELPJ (Fumarate reductase flavoprotein subunit OS=Helicobacter pylori J99 GN=frdA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.364e-22 Identity = 72/190 (37.89%), Postives = 99/190 (52.11%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMA-HRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYD-ERSELAPRDVVARSIDDQLKK 564 GG R AD TG +L AV ++ + D+L + D C+G ++ T E+ ++SK TLLA+GG G +Y TTN ++ G G A A A + NME VQFHPTAL G+ L+TE RGDGG+L + RFMP Y+ E+ ELA RDVV+R I + ++K Sbjct: 142 GGTKKWRTCFTADATGH----TMLYAVANEALHHKVDIQDRKDMLAFIHH-DNKCYGAVVRDLITGEISAYVSKGTLLATGGYGRVYKHTTNAVICDGAGAASALETGVAKLGNMEAVQFHPTALVPSGI------------LMTEGCRGDGGVLRDKFGRRFMPAYEPEKKELASRDVVSRRILEHIQK 314
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: DHSA_BACSU (Succinate dehydrogenase flavoprotein subunit OS=Bacillus subtilis GN=sdhA PE=3 SV=4) HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19 Identity = 69/250 (27.60%), Postives = 114/250 (45.60%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLG-------MERFMPLYDERSELAPRDVVARSIDD-----QLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKY-GLDITRQPIPCGPAAHY 711 GG HHR +A TG+++ AL E V + + + L + D C G+ N+ ++ F S ++A+GG G I+ +TN ++ TG ++ ++ A +N EF+Q HPTA+ + + L++E+ RG+GG ++ +E P Y L PRD+ R I D +L E V LD+SH+ +++ I K+ G D + P+ PA HY Sbjct: 117 GGTQHHRTAYAGATTGQQLLYALDEQVRRYEVAGLVTKYEGWEFLGAVLDDDRTCRGIVAQNLTNMQIESFRSDAVIMATGGPGIIFGKSTNSMINTGSAASIVYQQGAYYANGEFIQIHPTAIPGD----------DKLRLMSESARGEGGRVWTYKDGKPWYFLEEKYPAY---GNLVPRDIATREIFDVCVNQKLGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFMGDDPRKLPMKIFPAVHY 353
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_BACHD (L-aspartate oxidase OS=Bacillus halodurans GN=nadB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18 Identity = 70/200 (35.00%), Postives = 104/200 (52.00%), Query Frame = 1 Query: 1 GGHSHHRIVHAADM-TGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDIS 597 G H RIVH TG+ + RAL +A+ ++ I++ + + D + + VET + F + VT++A+GG G +Y T+N ATGDG+A+A+R+ A IS++EF+QFHPT + +E LI+EAVRG+GG L ER L RDVV+R I Q +R V LD++ Sbjct: 114 GAHGTRRIVHVNGAETGKAVMRALWKAIKNE--ITLLDRTCVYRFIKNKD---------EIIGVETDQGSLF-APVTIVATGGCGQMYSVTSNGKEATGDGIALAYRSGAAISDVEFIQFHPT--------VYTGNEKEKGLLISEAVRGEGGQLITSAGERL-------QSLKSRDVVSREIFRQ--EREGHTVHLDLT 284
BLAST of FC876205 vs. ExPASy Swiss-Prot
Match: NADB_PYRAB (L-aspartate oxidase OS=Pyrococcus abyssi GN=nadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11 Identity = 72/242 (29.75%), Postives = 101/242 (41.74%), Query Frame = 1 Query: 1 GGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHH---FAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRA--QAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERSELAPRDVVARSIDDQLKKRNEKYVLLDISHRPTEKILSHFPNIAAECLKYGLDITRQPIPCGPAAHY 711 GGHSH R+ TG+ + I + E H ++ + + +G E+++F ++A+GG +Y T V G+ + A + +MEFVQFHPT ++LITEAVRG G L ERF+ +EL RDVVAR+I LK K V LD R E FP + + K G+D + IP P AHY Sbjct: 106 GGHSHPRVFTIKSETGKHV-------------IPILEKHARELGVNFVRGFVEEIGIKNGKLAGVFLNGELLKF--DAVVVATGGFSGLYRFTAG--VKENIGLLIGDLALKGVPLRDMEFVQFHPTGFIG-----------RRTYLITEAVRGAGAKLVTGDGERFV------NELETRDVVARAI--YLKMLEGKGVFLDA--RGIEDFKDRFPYVYSVLKKEGIDPGKDLIPVTPVAHY 309 The following BLAST results are available for this feature:
BLAST of FC876205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876205 ID=FC876205; Name=FC876205; organism=Citrus clementina; type=EST; length=712bpback to top |