FC876209

Overview
NameFC876209
Unique NameFC876209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10894 contig Ccv1_Contig10894:38..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.765e-15
Identity = 52/168 (30.95%), Postives = 90/168 (53.57%), Query Frame = 2
Query:  167 RLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLF----HNQLIESVDLRMEIYDLTMNVMMRMIAGKRYYG 658
            RLPP P +  P++G L LL    H  L+N++K++GP++ L+ GS  + V S+P AA+      D+ F+NRP      H+  N   + +A YG  W+ LR+++++ IL    LQ    +R  E+  ++  +     H Q +  V   M  Y +  N++ +++  KR +G
Sbjct:   36 RLPPGP-IGWPVLGALPLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPV--VVSEMLTYAMA-NMLGQVMLSKRVFG 199          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.706e-15
Identity = 54/179 (30.17%), Postives = 94/179 (52.51%), Query Frame = 2
Query:  134 VLTKQFLNKIR-RLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-----QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            V++ + + ++R + PP P  + PI+G+LY +K    R     ++ +GPI+ +  GS   +VVSS   A+E   ++D   A+R      +    N   L WA YG H+  +R+V +LE+ +  RL+ L  IR DEV ++V  +F +        + + LR  +  +  N + R+  GKR+
Sbjct:   14 VVSYKLIQRLRYKFPPGPSPK-PIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRF 191          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.144e-14
Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = 2
Query:  170 LPPSPFLELPIIGHLYLL--KRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLI-ESVDLRMEIYDLTMNVMMRMIAG 643
            LPP P  +LP+IGHL+LL  K P H  L++++K++GP+  ++ G    +V+SS  A +E     D   A+R   +  K M  +   + ++PY  HWR +R++   E+LS+  ++    IR DEV  L+  L  +    E+VDL   I  LT +++ R   G
Sbjct:   35 LPPGP-PKLPLIGHLHLLWGKLPQH-ALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAGEAVDLTERIATLTCSIICRAAFG 193          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14
Identity = 54/179 (30.17%), Postives = 90/179 (50.28%), Query Frame = 2
Query:  125 ALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKR--PIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFH-NQLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            A +   +    K  RLPP P   LPIIG+L+ +++  P H  L  LSK +GPI  ++ G RR+ V+SS   A+E     D+ F  RP L   + M      L +  Y  ++R +R++  + + S +R+     +R +E + ++ +++       +VDL   +   T  V+ R   GKRY
Sbjct:   14 AAFFFLRSTTKKSLRLPPGP-KGLPIIGNLHQMEKFNPQH-FLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRY 190          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.548e-14
Identity = 52/169 (30.77%), Postives = 87/169 (51.48%), Query Frame = 2
Query:  170 LPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGP--ILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLV---RRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYYGK 661
            LPPSP   LPI+GHL+ +    H +L  L  ++G    L LR G+   L+VSSP AAE     +D + A+RP  M    +  N   +A++P G++W+  R++ +  +LS+ ++    + R +EV  +V   R         +VD+   +   T +V+ R + G  +  K
Sbjct:   56 LPPSPPGTLPIVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKK 224          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.328e-14
Identity = 50/172 (29.07%), Postives = 85/172 (49.42%), Query Frame = 2
Query:  170 LPPSPFLELPIIGHL--YLLKRPIHRTLSNLSKRHGP-ILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIE-----SVDLRMEIYDLTMNVMMRMIAGKRYYGK 661
            LPP P +  P++G+L   LL +P  R +  + +  G  I  ++ G   V+ ++ P  A E   K D  F +RP     +     + +   +PYGD W+ +RRV + EI+  SR   L + R DE  +L R +++          +VD+R        NV+ R++  +RY+G+
Sbjct:   68 LPPGP-VPWPVVGNLPEMLLNKPAFRWIHQMMREMGTDIACVKLGGVHVVSITCPEIAREVLRKQDANFISRPLTFASETFSGGYRNAVLSPYGDQWKKMRRVLTSEIICPSRHAWLHDKRTDEADNLTRYVYNLATKAATGDVAVDVRHVARHYCGNVIRRLMFNRRYFGE 238          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.677e-14
Identity = 54/187 (28.88%), Postives = 96/187 (51.34%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLE---LPIIGHLYLL--KRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAG 643
            L L L I + +   T   LNK  R P S   +   LP+IGHL+LL    P    L ++++ +GP+  ++ G    +V+SS  AA++     D  FA+R   +  + M  +   + ++PY DHW  +R++   E+LS   ++    IR +E++ L+R +  ++    VD+  E+  ++  V+ R   G
Sbjct:    3 LNLLLVIIILVATYTVSLLNKQWRKPKSQQKQPPKLPVIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLIRVMKQSE-GAPVDVTEEVSKMSCFVVCRAAFG 188          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.414e-14
Identity = 55/197 (27.92%), Postives = 98/197 (49.75%), Query Frame = 2
Query:   83 TSMKSLALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHL--YLLKRPIHRTLSNLSKR-HGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN-QLIESVDLRMEIYDLTMNVMMRMIAGKRYYGK 661
            T++++LA    + +   + +     K+  LPP P    PI+G +   L  RP+ R L +L K  +  I  +R G+  V+ V+ P  A E F + D +FA+RP     K +   + +    P+G+ ++ +R+V   EI+  +R + L + RA+E   L   L++  +  E VDLR        N + R++ G R + +
Sbjct:   29 TTLQALAALCFLMILNKIKSSSRNKKLHPLPPGP-TGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKRLMFGTRTFSE 224          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.414e-14
Identity = 48/152 (31.58%), Postives = 80/152 (52.63%), Query Frame = 2
Query:   95 SLALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVR 550
            S  + LP F+ L+   K       + PP P   LPI G+++ L    ++ ++ L +++GP+L L+ GS   +VV +  A+EE F  +DI FANR    V +       SLA APYG  WR  RR+ ++E+    ++     +R   V ++++
Sbjct:   11 SAIIILPAFI-LFFSQKNTTKSSYKFPPGP-PGLPIFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRKCVDNMLK 160          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.414e-14
Identity = 53/183 (28.96%), Postives = 99/183 (54.10%), Query Frame = 2
Query:  116 IFLALYVLTKQFLNKIRR------LPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAG 643
            I +A Y+++   +N+ R+      LPPSP  +LP+IGHL+ L   +      ++++++GP+  ++ G    +V+SS  AA++     D  FA+R   +  + M  +   + ++PY DHWR +RR+   E+LS   ++    IR +E++ L+ RL  +     VD+  E+  ++  V+ R   G
Sbjct:   11 ILVATYIVSL-LINQWRKSKSQQNLPPSP-PKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLI-RLLGSSGGAPVDVTEEVSKMSCVVVCRAAFG 190          
The following BLAST results are available for this feature:
BLAST of FC876209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
C75A5_EUSGR1.765e-1530.95Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C98A3_ARATH6.706e-1530.17Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71DD_MENPI1.144e-1434.16Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C83B1_ARATH1.951e-1430.17Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71C3_MAIZE2.548e-1430.77Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C79A1_SORBI3.328e-1429.07Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C7D94_MENGR5.677e-1428.88Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C79B3_ARATH7.414e-1427.92Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C76A2_SOLME7.414e-1431.58Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71DI_MENSP7.414e-1428.96Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32001G02EF DevOvary1 Citrus clementina cDNA clone C32001G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876209 ID=FC876209; Name=FC876209; organism=Citrus clementina; type=EST; length=667bp
GGAAAAAGGAGTGAGGCAATGCCCCCGATCTGAATTAAAGGTTCTCTCTC
ATGTTTCTTGGGCATAGCTAGCAGCCATACATACATCAATGAAGAGCTTG
GCTCTCTACTTGCCCATATTTCTGGCACTGTATGTCCTCACAAAGCAATT
TTTAAACAAAATCAGACGCCTCCCACCAAGTCCATTTCTTGAGCTACCCA
TAATTGGACATCTCTACCTCCTCAAGCGACCAATTCATAGAACACTATCC
AATTTATCAAAACGACACGGTCCCATTCTCCTCCTCCGATTCGGTTCTCG
CCGTGTCCTTGTTGTCTCATCACCACCAGCAGCCGAAGAATGCTTCACTA
AAAACGACATCGTCTTCGCCAACCGCCCTTCCTTGATGGTCGGCAAACAC
ATGGGTTGCAACTTCACGAGCCTCGCCTGGGCCCCATACGGCGACCACTG
GAGAAACCTTAGACGAGTCGCCTCGCTCGAAATTCTGTCCTCTTCTCGCC
TCCAACTCTTATCTAATATTCGCGCTGATGAGGTCAAATCTTTGGTCCGC
CGTCTCTTTCACAATCAATTGATCGAATCCGTTGACTTGAGGATGGAGAT
TTATGATCTCACAATGAATGTCATGATGAGGATGATCGCTGGAAAGAGAT
ATTACGGCAAACACGTG
back to top