FC876209

Overview
NameFC876209
Unique NameFC876209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10894 contig Ccv1_Contig10894:38..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.414e-14
Identity = 53/183 (28.96%), Postives = 99/183 (54.10%), Query Frame = 2
Query:  116 IFLALYVLTKQFLNKIRR------LPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAG 643
            I +A Y+++   +N+ R+      LPPSP  +LP+IGHL+ L   +      ++++++GP+  ++ G    +V+SS  AA++     D  FA+R   +  + M  +   + ++PY DHWR +RR+   E+LS   ++    IR +E++ L+ RL  +     VD+  E+  ++  V+ R   G
Sbjct:   11 ILVATYIVSL-LINQWRKSKSQQNLPPSP-PKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLI-RLLGSSGGAPVDVTEEVSKMSCVVVCRAAFG 190          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13
Identity = 51/188 (27.13%), Postives = 96/188 (51.06%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            LAL++   +A+ +   +   K  +LPP P + +PI G+   +   + HR L++ +KR G I LLR G R ++VVSSP  A+E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q        E +S+V  + +N    +  + +R  +  +  N+M R++  +R+
Sbjct:   11 LALFIAATIAVTI--SKLRGKRFKLPPGP-IPVPIFGYWLQVGDDLNHRNLTDYAKRFGEIFLLRMGQRNLVVVSSPELAKEVLHTQCVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWESEAESVVNDVKNNAEASVGGIVIRKRLQLMMYNIMYRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13
Identity = 58/193 (30.05%), Postives = 98/193 (50.78%), Query Frame = 2
Query:   95 SLALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKR-PIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTS-----LAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFH-NQLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            +LA  L  FL     TK++     +LPP P   LP+IG+L  L++    R  +  +K++GPIL  R GSR ++V+SS   A+E     D+ FA+RP      H G  F S     +A   Y  ++R +R++    + S +R+    ++R +E + ++ ++       E VD+   +   T +V+ R   GK+Y
Sbjct:   10 ALAAVLLFFLYQKPKTKRY-----KLPPGPS-PLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP-----PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKY 191          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 55/194 (28.35%), Postives = 97/194 (50.00%), Query Frame = 2
Query:   98 LALYLPIFLALY--VLTKQFLNKIR----RLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            L L     LAL+  ++   F++K+R    +LPP P + +PI G+   +   + HR L++L+K+ G I LLR G R ++VVSSP  A+E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q        E  ++V  +  N     E V +R  +  +  N M R++  +R+
Sbjct:    3 LLLVEKTLLALFAAIIASIFISKLRGKRFKLPPGP-VPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            +AL+  I  A  +L  +   K  +LPP P + +PI G+   +   + HR L++L+KR G ILLLR G R ++VVSSP  A+E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q        E  ++V  +  N     E + +R  +  +  N M R++  +R+
Sbjct:   11 VALFAAIIGA--ILISKLRGKKFKLPPGP-IPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAAAVVDDVKKNPAAATEGIVIRRRLQLMMYNNMFRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13
Identity = 51/188 (27.13%), Postives = 93/188 (49.47%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQ--LIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            LAL+L    A+ +   +   K  +LPP PF  +P+ G+   +   + HR L++L+KR   ILLLR   R ++V+SSP  A+E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q        E  S+V  +  N    +  + +R  +  +  N+M R++  +R+
Sbjct:   11 LALFLAAITAITI--SKLRGKPFKLPPGPF-PVPVFGNWLQVGDDLNHRNLTDLAKRFAEILLLRMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRLQLMMYNIMYRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13
Identity = 53/188 (28.19%), Postives = 93/188 (49.47%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            L L+L   +A+ V   +   K  +LPP P L +PI G+   +   + HR L+ L+KR G I LLR G R ++VVSSP  A+E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q   +    E  ++V  +  N    +  + +R  +  +  N M R++  +R+
Sbjct:   11 LGLFLAAVVAIVV--SKLRGKRFKLPPGP-LPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAAAVVDDVRKNPDAAVSGLVIRRRLQLMMYNNMYRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13
Identity = 52/181 (28.73%), Postives = 92/181 (50.83%), Query Frame = 2
Query:   95 SLALY--LPIFLALYVLTK-QFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFH-NQLIESVDLRMEIYDLTMNVM 625
            SL LY  L +F   +   K +  +    LPP P + LP++G+++ L    HR+L+  SK +GPI+ L+ G    +V+SSP AA+E    +D V + R      +    +  S+ W P    WR L++  +  +LS   L  + ++R  +V+ LV  +    +  E++DL    +  + N++
Sbjct:   10 SLPLYFLLTLFFFFFATAKTRRSSSTGTLPPGPPI-LPLVGNIFQLGFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERGEAIDLARASFVTSFNII 189          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13
Identity = 48/182 (26.37%), Postives = 90/182 (49.45%), Query Frame = 2
Query:  116 IFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            + + + +L  +   K  +LPP P L +P+ G+   +   + HR L++L+K+ G ILLLR G R ++VVSSP  ++E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q       +E   +V  +  N       + LR  +  +  N M R++  +R+
Sbjct:   15 VAILVAILVSKLRGKRFKLPPGP-LPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAATHGIVLRRRLQLMMYNNMYRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13
Identity = 46/158 (29.11%), Postives = 84/158 (53.16%), Query Frame = 2
Query:  170 LPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGD-HWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFH-NQLIESVDLRMEIYDLTMNVMMRMI 637
            LPP P   LPIIG+++ + +  H + ++L+K +GPI+ L+FG    +V++SP AA E    +D + + R S    +  G    S+ W P     WR LR+++   + S  R +    +R  +V+ LV  +   ++  E+VD+    Y   +N++  ++
Sbjct:   38 LPPGP-PRLPIIGNIHQVGKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRCFGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNIISNIL 194          
The following BLAST results are available for this feature:
BLAST of FC876209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
C71DI_MENGR7.414e-1428.96Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
TCMO_MEDSA1.652e-1327.13Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C83A1_ARATH2.157e-1330.05Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_ZINEL3.679e-1328.35Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_HELTU3.679e-1328.72Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_PEA4.806e-1327.13Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_PHAAU6.276e-1328.19Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C76C3_ARATH6.276e-1328.73Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_POPTM8.197e-1326.37Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C76C4_ARATH8.197e-1329.11Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC32001G02EF DevOvary1 Citrus clementina cDNA clone C32001G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876209 ID=FC876209; Name=FC876209; organism=Citrus clementina; type=EST; length=667bp
GGAAAAAGGAGTGAGGCAATGCCCCCGATCTGAATTAAAGGTTCTCTCTC
ATGTTTCTTGGGCATAGCTAGCAGCCATACATACATCAATGAAGAGCTTG
GCTCTCTACTTGCCCATATTTCTGGCACTGTATGTCCTCACAAAGCAATT
TTTAAACAAAATCAGACGCCTCCCACCAAGTCCATTTCTTGAGCTACCCA
TAATTGGACATCTCTACCTCCTCAAGCGACCAATTCATAGAACACTATCC
AATTTATCAAAACGACACGGTCCCATTCTCCTCCTCCGATTCGGTTCTCG
CCGTGTCCTTGTTGTCTCATCACCACCAGCAGCCGAAGAATGCTTCACTA
AAAACGACATCGTCTTCGCCAACCGCCCTTCCTTGATGGTCGGCAAACAC
ATGGGTTGCAACTTCACGAGCCTCGCCTGGGCCCCATACGGCGACCACTG
GAGAAACCTTAGACGAGTCGCCTCGCTCGAAATTCTGTCCTCTTCTCGCC
TCCAACTCTTATCTAATATTCGCGCTGATGAGGTCAAATCTTTGGTCCGC
CGTCTCTTTCACAATCAATTGATCGAATCCGTTGACTTGAGGATGGAGAT
TTATGATCTCACAATGAATGTCATGATGAGGATGATCGCTGGAAAGAGAT
ATTACGGCAAACACGTG
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