FC876209

Overview
NameFC876209
Unique NameFC876209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C519D_DICDI (Probable cytochrome P450 519D1 OS=Dictyostelium discoideum GN=cyp519d1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13
Identity = 54/185 (29.19%), Postives = 94/185 (50.81%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIES--VDLRMEIYDLTMNVMMRMIAGK 646
            L  ++ I   L+ L K+   K++  PP+P L LP+IGHLYLL    +R+   LSKR+G I  +  G    +V++ P    E + K  + F NRP           F +L+++ Y   W  LR++ S    + S+++ +SN+   +   L+  + +N  I +   + +  I+ LT+NV+  +   K
Sbjct:    6 LTFFICIIYLLFDLIKKN-KKLKDEPPTPKLALPLIGHLYLLGDRPNRSFLELSKRYGGIFKIWMGEYPTVVLTDPDHVNEVWCKQFLNFTNRPHFNSLDQFSSGFRNLSFSDY-PLWSELRKLVS-SSFTKSKVKGISNLLETQTNYLINTM-NNYSINNKPFNPKKYIHKLTLNVVCMIAFSK 186          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12
Identity = 51/188 (27.13%), Postives = 94/188 (50.00%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            + L+L   +A+ V T +   +  +LPP P L +PI G+   +   + HR L++L+K+ G I LLR G R ++VVSSP  A+E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q   +    E  ++V  +  N    +    +R  +  +  N M R++  +R+
Sbjct:   11 IGLFLAAVVAIAVSTLR--GRKFKLPPGP-LPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C519B_DICDI (Probable cytochrome P450 519B1 OS=Dictyostelium discoideum GN=cyp519b1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12
Identity = 54/185 (29.19%), Postives = 98/185 (52.97%), Query Frame = 2
Query:  110 LPIFLALYVLTKQFLNKIRRL----PPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRL--FHNQLIESVDLRMEIYDLTMNVMMRMIAGK 646
            L ++  L+ +   F+ K RR+    PPSP+  LPIIGHL+ L    HR+L+ L+K +G +  L  G  + +V++   A ++   K    FANRP       +  NF  LA+A Y D W+  R++ S   L+ ++++  +N+   + ++L+  +  F N+  E    R  +   ++N+++ M+  K
Sbjct:    6 LILYFILFWIVFDFIRKNRRISFNDPPSPWA-LPIIGHLHKLSLNPHRSLTELAKVYGGVYSLHIGDSKTVVITDVSAFKDVTIKQFKNFANRPQ-PKSIRVITNFKGLAFADY-DQWQKTRKLVS-SALTKTKIKTFNNLIEKQTENLIESMNEFSNK-NELFHPRKYLTKYSLNIILSMLFSK 185          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C519E_DICDI (Probable cytochrome P450 519E1 OS=Dictyostelium discoideum GN=cyp519e1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.398e-12
Identity = 45/141 (31.91%), Postives = 73/141 (51.77%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNI 520
            + LYL I L  Y  TK+   KI +  P   L +P++GHL+L     HR+L+ L+K+ G I  L  G  R +V++ P    E + KN + F NR S    +    N   ++++  G+ W+N RR  S  +  +  L +++ I
Sbjct:    6 IILYLLIGLLAYDFTKKN-KKISKNDPKQPLAIPVLGHLHLFGSQPHRSLTELAKKFGGIFTLWMGDERSMVITDPNILRELYVKNHLNFYNRASSESIRIYSGNLVDISFS-VGESWKNRRRYVSAALTKTKVLNVITLI 144          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 2
Query:  110 LPIFLALYVLTKQFLNKIR----RLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            L +F+A   +T   ++K+R    +LPP P + +PI G+   +   + HR L++L+KR G I LLR G R ++VVSSP  A+E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q        E  S+V  +  N       + LR  +  +  N M R++  +R+
Sbjct:   11 LGLFIA--AITAIAISKLRGRRFKLPPGP-IPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVRRNPDAAAGGIVLRRRLQLMMYNNMYRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12
Identity = 52/186 (27.96%), Postives = 91/186 (48.92%), Query Frame = 2
Query:  119 FLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKR----HGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMN----VMMRMIAGKRY 652
            FL L  L K+        PPSP+  LP+IG+L+ L    HR+  +LS R    H P L      R    +SS   A +    +D+ FANRP       +      +A++ YG++WR ++ + ++ +L    ++    +R +E+ S++ +L   +   S  L + + DL +N    V+ R+  G++Y
Sbjct:   14 FLFLNPLLKRTTTTKPNQPPSPW-RLPVIGYLHQLSLHPHRSFRSLSLRLWSAHAPSLRSCPYPRFSKYISSSDVAHDVMKTHDLKFANRPKTKAVDIIINGGRDVAFSSYGEYWRQMKSLCTVHLLGRQMVRSFEKVREEEITSVIWKL---EKQSSSSLPVNLSDLLLNMSNDVICRIAVGRKY 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.115e-12
Identity = 47/176 (26.70%), Postives = 86/176 (48.86%), Query Frame = 2
Query:  134 VLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            +L  +   K  +LPP P L +P+ G+   +   + HR L++L+K+ G I LLR G R ++VVSSP  ++E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q       +E   +V  +  N       + LR  +  +  N M R++  +R+
Sbjct:   21 ILVSKLRGKRFKLPPGP-LPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAATNGIVLRRRLQLMMYNNMYRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12
Identity = 50/186 (26.88%), Postives = 90/186 (48.39%), Query Frame = 2
Query:  110 LPIFLALYV--LTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            L +F A+ V  +  +   K  +LPP P + +P+ G+   +   + HR LS+ +K+ G I LLR G R ++VVSSP  A+E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q       +E   +V  +  N       + LR  +  +  N M R++  +R+
Sbjct:   11 LGLFAAIIVASIVSKLRGKKFKLPPGP-IPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDVKKNPESATNGIVLRRRLQLMMYNNMYRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.184e-11
Identity = 48/188 (25.53%), Postives = 91/188 (48.40%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPI-HRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHN--QLIESVDLRMEIYDLTMNVMMRMIAGKRY 652
            +A+++ + LA  +   +   K  +LPP P + +PI G+   +   + HR L + +K+ G + LLR G R ++VVSSP   +E      + F +R   +V          + +  YG+HWR +RR+ ++   ++  +Q        E  S+V  +  N     + + LR  +  +  N M R++  +R+
Sbjct:   11 IAVFVAVILATVI--SKLRGKKLKLPPGP-IPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQRNLVVVSSPDLTKEVLLTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNREGWEFEAASVVEDVKKNPDSATKGIVLRKRLQLMMYNNMFRIMFDRRF 195          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C79F1_ARATH (Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11
Identity = 51/169 (30.18%), Postives = 83/169 (49.11%), Query Frame = 2
Query:  167 RLPPSPFLELPIIGHL--YLLKRPIHRTLSNLSKR-HGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFH-NQLIESVDLRMEIYDLTMNVMMRMIAGKRYYGK 661
            +LPP P    PI+G+L    + RP  +      K     I    F   R + ++S   A E F + D   A+RP L + + +G N+ S+  +PYG+ +  ++RV + EI+S   L++L   R  E  +L+  +    Q  E+VD+R         V MRM+ G+R+  K
Sbjct:   44 QLPPGP-PGWPILGNLPELFMTRPRSKYFRLAMKELKTDIACFNFAGIRAITINSDEIAREAFRERDADLADRPQLFIMETIGDNYKSMGISPYGEQFMKMKRVITTEIMSVKTLKMLEAARTIEADNLIAYVHSMYQRSETVDVRELSRVYGYAVTMRMLFGRRHVTK 211          
The following BLAST results are available for this feature:
BLAST of FC876209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
C519D_DICDI8.197e-1329.19Probable cytochrome P450 519D1 OS=Dictyostelium di... [more]
TCMO_SOYBN1.071e-1227.13Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C519B_DICDI1.071e-1229.19Probable cytochrome P450 519B1 OS=Dictyostelium di... [more]
C519E_DICDI1.398e-1231.91Probable cytochrome P450 519E1 OS=Dictyostelium di... [more]
TCMO_GLYEC1.826e-1228.72Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C71AS_ARATH2.385e-1227.96Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
TCMO_POPKI3.115e-1226.70Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CATRO4.068e-1226.88Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_ARATH1.184e-1125.53Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C79F1_ARATH1.546e-1130.18Dihomomethionine N-hydroxylase OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32001G02EF DevOvary1 Citrus clementina cDNA clone C32001G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876209 ID=FC876209; Name=FC876209; organism=Citrus clementina; type=EST; length=667bp
GGAAAAAGGAGTGAGGCAATGCCCCCGATCTGAATTAAAGGTTCTCTCTC
ATGTTTCTTGGGCATAGCTAGCAGCCATACATACATCAATGAAGAGCTTG
GCTCTCTACTTGCCCATATTTCTGGCACTGTATGTCCTCACAAAGCAATT
TTTAAACAAAATCAGACGCCTCCCACCAAGTCCATTTCTTGAGCTACCCA
TAATTGGACATCTCTACCTCCTCAAGCGACCAATTCATAGAACACTATCC
AATTTATCAAAACGACACGGTCCCATTCTCCTCCTCCGATTCGGTTCTCG
CCGTGTCCTTGTTGTCTCATCACCACCAGCAGCCGAAGAATGCTTCACTA
AAAACGACATCGTCTTCGCCAACCGCCCTTCCTTGATGGTCGGCAAACAC
ATGGGTTGCAACTTCACGAGCCTCGCCTGGGCCCCATACGGCGACCACTG
GAGAAACCTTAGACGAGTCGCCTCGCTCGAAATTCTGTCCTCTTCTCGCC
TCCAACTCTTATCTAATATTCGCGCTGATGAGGTCAAATCTTTGGTCCGC
CGTCTCTTTCACAATCAATTGATCGAATCCGTTGACTTGAGGATGGAGAT
TTATGATCTCACAATGAATGTCATGATGAGGATGATCGCTGGAAAGAGAT
ATTACGGCAAACACGTG
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