FC876209

Overview
NameFC876209
Unique NameFC876209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10894 contig Ccv1_Contig10894:38..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20
Identity = 67/223 (30.04%), Postives = 116/223 (52.02%), Query Frame = 2
Query:   44 LSHVSWA*LAAIHTSMKSLALYLPIFLALYVLTKQFL--------------------NKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGP-ILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLI-ESVDLRMEIYDLTMNVMMRMIAGK 646
            L H  +  L     + ++L L +P  L L  L  ++L                    +K+  L PSP ++LPIIGHL+L+    + +L+ L+ R+GP ++LLR G+   +VVSSP  AE      D VF++RP  +V   +    T   +APYGDH+R  R++ ++ +L++S+++     R +EV+  + R+       E VD+   ++    N++ R ++GK
Sbjct:    5 LHHALYELLHEAAAAQRALLLAIPFSLLLLPLLLRYLAASASASATKNDGAAPASDPDKLLSLLPSPPMKLPIIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGK 227          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.042e-20
Identity = 56/158 (35.44%), Postives = 101/158 (63.92%), Query Frame = 2
Query:   89 MKSLALYLPI-FLALYVLTKQFL--NKIRRLPPSPFLELPIIGHLYLLK--RPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLV 547
            M+ ++++L I FL L    K++   ++ ++LPP P+ +LP IG ++ L   RP HR L +L+K++GP++ L+ G    +VV+SP  A+E    +DI FA+RP L+    +  +   +A++PYG++W+ +R++   E+LS+  ++  S+IR DEV  L+
Sbjct:    1 MQLISIFLFICFLFLLRKWKKYSKNSQTKKLPPGPW-KLPFIGSMHHLAGGRP-HRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLI 156          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.042e-20
Identity = 55/193 (28.50%), Postives = 107/193 (55.44%), Query Frame = 2
Query:   83 TSMKSLALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIES-VDLRMEIYDLTMNVMMRMIAGKRYYG 658
            T++  L+L   I + + V   +     +R PPSP    PIIG+L+ L    H++L  LSK++GP++LL+ G    ++VSS   A++    +D+   +RP     + +  N+  +A++PY D+W+ +R++A  E+ SS ++  +  I+ +EVK L+  +  +   ++ ++L   +  LT++V+ R      + G
Sbjct:    2 TNIWLLSLIFVICILVAVFNHKNRRNYQRTPPSP-PGCPIIGNLHQLGELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRTAFSVNFEG 193          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.181e-19
Identity = 50/134 (37.31%), Postives = 84/134 (62.69%), Query Frame = 2
Query:  164 RRLPPSPFLELPIIGHL-YLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFH 562
            ++ PP P+  LP+IG+L +L     H  L +L+ +HGP++ LR G    +V+SSP AA+E     D  FA+RPSL+V   +      +++APYG +WR LR++   E+L++ +++ L+ +R  E  SLVR++ +
Sbjct:   25 KKRPPGPW-RLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVY 157          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.181e-19
Identity = 63/185 (34.05%), Postives = 97/185 (52.43%), Query Frame = 2
Query:   98 LALYLPIFLALYVLTKQFLNKIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVG-KHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLI-ESVDLRMEIYDLTMNVMMRMIAGK 646
            + L   I  A  +  KQ  NK   LPPSP + LPIIGHL+LL    H+    LS R+GPI+ L  GS   +V S+  AA+E    ++  F+NRP+  V  + +   F    +APYG +W+ ++++   E+L    L     +R  E K  ++R+    +  E+VD   E   L+ N++ RMI  +
Sbjct:    8 ICLISTIVFASILWRKQNKNKTL-LPPSP-MPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKGISGEAVDFGGEFITLSNNIVSRMIVSQ 190          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.181e-19
Identity = 57/178 (32.02%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  116 IFLALYVLTKQFLN----KIRRLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMI 637
            I++ +Y++ ++ +     + RRLPP P    P+IG L LL    H  L+ ++K++GPI+ L+ G+  ++V S+P AA+      DI F+NRP      HM  N   + +APYG  W+ LR++++L +L    L+  +N+RA+E+  +++ +F       V  R+ + D+    M  MI
Sbjct:   14 IYIIVYIIIQKLIATGSWRRRRLPPGPE-GWPVIGALPLLGGMPHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFD---ASHVGERIVVADMLTFAMANMI 187          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.181e-19
Identity = 59/177 (33.33%), Postives = 104/177 (58.76%), Query Frame = 2
Query:  119 FLALYVLTKQFLNKIR----RLPPSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIES-VDLRMEIYDLTMNVMMRM 634
            FL L  L   FL K++    +LPP P  +LP IG+L+ L+    R   NL+ ++GP++LLRFG   ++V+SS  AAEE    +D+   +RP     + +  NF  + +APYG+ W+ +R+++ +E+ ++ + Q   +IR +E   LV++L    L  S V+L+  ++ L  +++ R+
Sbjct:    7 FLILLPLILIFLKKLKHSKWKLPPGP-PKLPFIGNLHQLQELPPR---NLNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTLFTLVGSIVCRI 179          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.542e-19
Identity = 58/161 (36.02%), Postives = 94/161 (58.39%), Query Frame = 2
Query:  170 LPPSPFLELPIIGHLYL-LKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQL-IESVDLRMEIYDLTMNVMMRMIAGK 646
            LPPSP   LPIIGHL+L L  PIH++  N+S ++GP+L LRF +  +++VSS   A E F   D+  ++RP   + + +    +S    PYGD+ + +++    ++L    LQ   NIRADE++   + L    +  ++V++R E   LT N + +MI G+
Sbjct:   42 LPPSP-PSLPIIGHLHLILFVPIHQSFKNISSKYGPLLHLRFFNFPIVLVSSASTAYEIFKAQDVNVSSRPPPPIEESLILGSSSFINTPYGDYSKFMKKFMVQKLLGPQALQRSRNIRADELERFYKTLLDKAMKKQTVEIRNEAMKLTNNTICKMIMGR 201          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19
Identity = 63/192 (32.81%), Postives = 101/192 (52.60%), Query Frame = 2
Query:   95 SLALYLPIF-LALYVLTKQFLNKIRRLP----PSPFLELPIIGHLYLLKRPIHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPSLMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKRYY 655
            SL LY  IF   L  + + F  K   LP    P P+   PIIG+L  L    H++ + +++ +GP++ L+ G   V+V +S   A +    +D  F++RP     +HM  N+  L +APYG  WR LR++ S+ + S+  L    ++R DEVK+L R L  +   + V L   +   T N + R++ GKR +
Sbjct:    5 SLILYTVIFSFLLQFILRSFFRKRYPLPLPPGPKPW---PIIGNLVHLGPKPHQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRAL-ASAGQKPVKLGQLLNVCTTNALARVMLGKRVF 192          
BLAST of FC876209 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.631e-19
Identity = 55/162 (33.95%), Postives = 96/162 (59.26%), Query Frame = 2
Query:  170 LPPSPFLELPIIGHLYLLKRP-IHRTLSNLSKRHGPILLLRFGSRRVLVVSSPPAAEECFTKNDIVFANRPS-LMVGKHMGCNFTSLAWAPYGDHWRNLRRVASLEILSSSRLQLLSNIRADEVKSLVRRLFHNQLIESVDLRMEIYDLTMNVMMRMIAGKR 649
            LPP P  ++PI+G+ + L     H  L +L+K++GP++ L+ G    +V SSP  AEE F  +DI+FA+RPS L   K +  +F+ +  +PYG++WR LR+++ +E+LS   +Q   +IR +EV + ++ +   +    ++L  EI  L   +  R   G++
Sbjct:   26 LPPGP-PQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTR-INLSKEISLLIYGITTRAAFGEK 185          
The following BLAST results are available for this feature:
BLAST of FC876209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
C71C4_MAIZE4.059e-2030.04Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71D6_SOLCH9.042e-2035.44Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BV_ARATH9.042e-2028.50Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C99A1_SORBI1.181e-1937.31Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C93A3_SOYBN1.181e-1934.05Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C75A2_SOLME1.181e-1932.02Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71BT_ARATH1.181e-1933.33Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
THAD_ARATH1.542e-1936.02Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
F3PH_PETHY2.014e-1932.81Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71DC_CATRO2.631e-1933.95Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32001G02EF DevOvary1 Citrus clementina cDNA clone C32001G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876209 ID=FC876209; Name=FC876209; organism=Citrus clementina; type=EST; length=667bp
GGAAAAAGGAGTGAGGCAATGCCCCCGATCTGAATTAAAGGTTCTCTCTC
ATGTTTCTTGGGCATAGCTAGCAGCCATACATACATCAATGAAGAGCTTG
GCTCTCTACTTGCCCATATTTCTGGCACTGTATGTCCTCACAAAGCAATT
TTTAAACAAAATCAGACGCCTCCCACCAAGTCCATTTCTTGAGCTACCCA
TAATTGGACATCTCTACCTCCTCAAGCGACCAATTCATAGAACACTATCC
AATTTATCAAAACGACACGGTCCCATTCTCCTCCTCCGATTCGGTTCTCG
CCGTGTCCTTGTTGTCTCATCACCACCAGCAGCCGAAGAATGCTTCACTA
AAAACGACATCGTCTTCGCCAACCGCCCTTCCTTGATGGTCGGCAAACAC
ATGGGTTGCAACTTCACGAGCCTCGCCTGGGCCCCATACGGCGACCACTG
GAGAAACCTTAGACGAGTCGCCTCGCTCGAAATTCTGTCCTCTTCTCGCC
TCCAACTCTTATCTAATATTCGCGCTGATGAGGTCAAATCTTTGGTCCGC
CGTCTCTTTCACAATCAATTGATCGAATCCGTTGACTTGAGGATGGAGAT
TTATGATCTCACAATGAATGTCATGATGAGGATGATCGCTGGAAAGAGAT
ATTACGGCAAACACGTG
back to top