FC876212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 8.083e-93 Identity = 167/179 (93.30%), Postives = 173/179 (96.65%), Query Frame = 2 Query: 134 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 MATY PKNILITGAAGFIASHV NRL+R+YP+YKIVVLDKLDYCSNLKNL PSK+S NFKFV+GDIASADLVN+LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL Sbjct: 1 MATYKPKNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 1.056e-92 Identity = 168/179 (93.85%), Postives = 173/179 (96.65%), Query Frame = 2 Query: 134 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 MA+YTPKNILITGAAGFIASHV NRLIR+YP+YKIVVLDKLDYCSNLKNL PSK S NFKFV+GDIASADLVN LLITE IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA+VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL Sbjct: 1 MASYTPKNILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 179
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.290e-90 Identity = 164/177 (92.66%), Postives = 170/177 (96.05%), Query Frame = 2 Query: 140 TYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 TY PKNILITGAAGFIASHV NRLIRNYP+YKIVVLDKLDYCS+LKNL PS +S NFKFV+GDIAS DLVN+LLITE+IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL Sbjct: 5 TYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 181
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: TGDS_MOUSE (dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43 Identity = 89/171 (52.05%), Postives = 115/171 (67.25%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 664 K +L+TG AGFIASHV L+ +YP+Y IV LDKLDYC++LKNL P N+KF++GDI + V L E ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A G + +FI+VSTDEVYG + + E+S PTNPY+++KA AE V +Y Y Sbjct: 18 KRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAG-VEKFIYVSTDEVYGGSLDQEF---DESSPKQPTNPYASSKAAAECFVQSYWERY 184
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: TGDS_HUMAN (dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.494e-42 Identity = 86/171 (50.29%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 664 K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KF++GDI + V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++ +FI+VSTDEVYG + + E+S PTNPY+++KA AE V +Y Y Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEKFIYVSTDEVYGGSLDKEF---DESSPKQPTNPYASSKAAAECFVQSYWEQY 184
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: TGDS_BOVIN (dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.494e-42 Identity = 86/171 (50.29%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 664 K +L+TG AGFIASH+ L+ +YP Y I+ LDKLDYC++LKNL N+KF++GDI + V L TE ID ++HFAAQTHVD SF +FEFT N+YGTHVL+ A ++ +FI+VSTDEVYG + + E+S PTNPY+++KA AE V +Y Y Sbjct: 18 KRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH-EARVEKFIYVSTDEVYGGSLDKEF---DESSPKQPTNPYASSKAAAECFVQSYWEQY 184
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: TGDS_DICDI (dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum GN=tgds PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.209e-41 Identity = 90/181 (49.72%), Postives = 119/181 (65.75%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYG--------ETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 + ILITG AGFI SH+ L + + KI+VLDKLDYCSN+ NL NFKF +G+I ++L+ + E ID ++H AA THVDNSF S +FT+NNI GTH LLE CK ++++FI+VSTDEVYG + + ++E S L PTNPYSA+KAGAE LV +Y +S+ L Sbjct: 10 QKILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCK-NYKLKKFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFKL 189
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: TGDS_MIMIV (Putative dTDP-D-glucose 4,6-dehydratase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R141 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.037e-39 Identity = 84/173 (48.55%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 KNIL+TG GFI S+ N + Y I V D DYC++++N+ + ++ K ++GDI + DL+ L IDTI+HFAA +HVDNSF NS FT+ N++GTHVLLE ++ G+++ F H+STDEVYGE D + E S L PTNPY+ATKAGAE +V +Y SY L Sbjct: 2 KNILVTGGLGFIGSNFVNHISSKYDNVNIYVYDIGDYCASVENV---EWNNRTKLIKGDIRNFDLIMHTLTEHEIDTIVHFAAHSHVDNSFKNSLAFTETNVFGTHVLLECSRMYGKLKLFFHMSTDEVYGEIDTTDT--SREVSLLCPTNPYAATKAGAEHIVKSYFLSYKL 169
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: ACBB_ACTS5 (dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain 50/110) GN=acbB PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.092e-32 Identity = 78/176 (44.32%), Postives = 105/176 (59.66%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRN-----YPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 IL+TG AGFI SH LI P ++ V+DKL Y NL+NL + A F FVRGDI L+ L+ DT+ HFAA+THVD S S F +N+ GT VLL+A + I RF+HVSTDEVYG D + H L P +PY+A+KAG+++L +AY +++G+ Sbjct: 3 ILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSFVRGDICDEGLIEGLMARH--DTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAA-LRHHIGRFLHVSTDEVYGSIDTGSWAEGH---PLAPNSPYAASKAGSDLLALAYHQTHGM 172
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: YHEB_SCHPO (Uncharacterized protein PB2B2.11 OS=Schizosaccharomyces pombe GN=SPBPB2B2.11 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.459e-27 Identity = 75/182 (41.21%), Postives = 107/182 (58.79%), Query Frame = 2 Query: 161 LITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKA--SSNFKFVRGDIAS--ADLVNFLLITESIDTIMH---FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIR---RFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 664 LITG AGFI S+ + + YP++ +DKL Y SN + SK NF+F+ D+A+ L F++ I+ I H FAA++ VD SF + FTKNNI T LLE ++ ++R F+HVSTDEVYGE DE+A V E S+L PT+PY+A+KA ++++ +Y SY Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILLGKKEELRNRLNFVHVSTDEVYGEQDENASV--DEKSKLNPTSPYAASKAAVDLIIQSYRYSY 192 The following BLAST results are available for this feature:
BLAST of FC876212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876212 ID=FC876212; Name=FC876212; organism=Citrus clementina; type=EST; length=670bpback to top |