FC876212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: SPSJ_BACSU (Spore coat polysaccharide biosynthesis protein spsJ OS=Bacillus subtilis GN=spsJ PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.007e-26 Identity = 68/173 (39.31%), Postives = 107/173 (61.85%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 K+ LITG AGFI ++R + +I VLDKL Y S+ + + K +S F+FV+GDI+ + ++ E+ D ++HFAA++HVD S + F N+ GT+ L EA + G+ ++ IH+STDEVYG+ D E + L P NPYSA+KA +++LV++Y +++ L Sbjct: 3 KSYLITGGAGFIGLTFTKLMLRE-TDARITVLDKLTYASHPEEMEKLKQNSRFRFVKGDISVQEDID-RAFDETYDGVIHFAAESHVDRSISQAEPFITTNVMGTYRLAEAV-LKGKAKKLIHISTDEVYGDLKADDPAFT-ETTPLSPNNPYSASKASSDLLVLSYVKTHKL 171
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RFBB_SHIFL (dTDP-glucose 4,6-dehydratase OS=Shigella flexneri GN=rfbB PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26 Identity = 72/186 (38.71%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--------VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAYGRSYGL 670 IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F DI A ++ + D +MH AA++HVD S F + NI GT+VLLEA + + RF H+STDEVYG+ N+EA L P++PYSA+KA ++ LV A+ R+YGL Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYAFEHADICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALNDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGL 187
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RFBB_ECOLX (dTDP-glucose 4,6-dehydratase OS=Escherichia coli GN=rfbB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26 Identity = 72/186 (38.71%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK--------VTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAYGRSYGL 670 IL+TG AGFI S V +I N + +V +DKL Y NL++L S + F DI A+ +D +MH AA++HVD S F + NI GT+VLLEA + + RF H+STDEVYG+ V ++E QL P++PYSA+KA ++ LV A+ R+YGL Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLAEISDSERYSFENADICDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGL 187
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RMLB_STRMU (dTDP-glucose 4,6-dehydratase OS=Streptococcus mutans GN=rmlB PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 6.524e-26 Identity = 71/182 (39.01%), Postives = 107/182 (58.79%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD-EDAVVGNHEA--------SQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 KNI++TG AGFI S+ + + N+P+ + VLDKL Y N NL + V GDIA ++LV+ L D I+H+AA++H DNS + F N GT++LLEA + RF HVSTDEVYG+ + + G+ E ++ P++PYS+TKA ++++V A+ RS+G+ Sbjct: 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANL-EEILGDRVELVVGDIADSELVDKL--AAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGV 181
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RFBB_NEIGO (dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae GN=rfbB PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.113e-25 Identity = 75/190 (39.47%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 134 MATYTPKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--------IRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 M T KNIL+TG AGFI S V +I+N + +V LDKL Y NL++L + + F + DI ++ + D +MH AA++HVD + G++ EF + NI GT LLEA + Q RF H+STDEVYG+ TD+ E + P++PYSA+KA A+ LV A+ R+Y L Sbjct: 1 MQTEGKKNILVTGGAGFIGSAVVRHIIQNTRD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFT----ETTPYAPSSPYSASKAAADHLVRAWQRTYRL 185
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMA (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A GN=rfbB1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.453e-25 Identity = 73/184 (39.67%), Postives = 104/184 (56.52%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--------IRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 + IL+TG AGFI S V +IRN + +V LDKL Y NL++L + + F + DI ++ + D +MH AA++HVD S G++ EF + NI GT LLEA + Q RF H+STDEVYG+ TD+ E + P++PYSA+KA ++ LV A+ R+YGL Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTQD-SVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMPSEKHEAFRFHHISTDEVYGDLSGTDDLFT----ETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RFBB_SALTY (dTDP-glucose 4,6-dehydratase OS=Salmonella typhimurium GN=rfbB PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.421e-25 Identity = 70/186 (37.63%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK----VTGQIR----RFIHVSTDEVYGETDEDAVVGNH-------EASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 ILITG AGFI S V +I+N + +V +DKL Y NL++L S+ + F DI + + + D +MH AA++HVD S F + NI GT+ LLE + G+ + RF H+STDEVYG+ V N E + P++PYSA+KA ++ LV A+ R+YGL Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGL 187
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMB (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B GN=rfbB1 PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 9.421e-25 Identity = 72/184 (39.13%), Postives = 104/184 (56.52%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ--------IRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 + IL+TG AGFI S V +IRN + +V +DKL Y NL++L + + F + DI ++ + D +MH AA++HVD S G++ EF + NI GT LLEA + Q RF H+STDEVYG+ TD+ E + P++PYSA+KA ++ LV A+ R+YGL Sbjct: 2 RKILVTGGAGFIGSAVVRHIIRNTRD-AVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFT----ETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RFBB_ECOLI (dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=rfbB PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 9.421e-25 Identity = 71/186 (38.17%), Postives = 96/186 (51.61%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR--------RFIHVSTDEVYGETDEDAVVGNHEASQLL-------PTNPYSATKAGAEMLVMAYGRSYGL 670 IL+TG AGFI S V +I N + +V +DKL Y N ++L S + F DI A + + D +MH AA++HVD S F + NI GT+VLLEA + RF H+STDEVYG+ V N E L P++PYSA+KA ++ LV A+ R+YGL Sbjct: 3 ILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGL 187
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: RFFG_ECOLI (dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=rffG PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 2.099e-24 Identity = 73/184 (39.67%), Postives = 98/184 (53.26%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV--------TGQIRRFIHVSTDEVYGE---TDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 + ILITG AGFI S + R I N +VV+DKL Y NL +L P S F F + DI + + D +MH AA++HVD S F + NI GT+ LLEA + RF H+STDEVYG+ TD+ E + P++PYSA+KA ++ LV A+ R+YGL Sbjct: 2 RKILITGGAGFIGSALV-RYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT----ETTPYAPSSPYSASKASSDHLVRAWLRTYGL 180 The following BLAST results are available for this feature:
BLAST of FC876212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876212 ID=FC876212; Name=FC876212; organism=Citrus clementina; type=EST; length=670bpback to top |