FC876212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_ECOLI (UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.571e-14 Identity = 50/165 (30.30%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 +L+TG +G+I SH C +L++N + +++LD L C++ ++++P K FV GDI + L+ +L +IDT++HFA V S E+ NN+ GT L+ A + ++ FI S+ VYG+ + V + P +PY +K E ++ Sbjct: 3 VLVTGGSGYIGSHTCVQLLQN--GHDVIILDNL--CNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKNFIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVEQIL 160
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_SALTY (UDP-glucose 4-epimerase OS=Salmonella typhimurium GN=galE PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 50/165 (30.30%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 +L+TG +G+I SH C +L++N + +V+LD L C++ ++++P K FV GDI + L+ +L +IDT++HFA V S E+ NN+ GT L+ A + ++ I S+ VYG+ + V + P +PY +K E ++ Sbjct: 3 VLVTGGSGYIGSHTCVQLLQN--GHDVVILDNL--CNSKRSVLPVIERLGGKHPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVARPLEYYDNNVNGTLRLVSAMR-AANVKNLIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVEQIL 160
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_SALTI (UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 50/165 (30.30%), Postives = 86/165 (52.12%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFK---FVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 +L+TG +G+I SH C +L++N + +V+LD L C++ ++++P K FV GDI + L+ +L +IDT++HFA V S E+ NN+ GT L+ A + ++ I S+ VYG+ + V + P +PY +K E ++ Sbjct: 3 VLVTGGSGYIGSHTCVQLLQN--GHDVVILDNL--CNSKRSVLPVIERLGGKHPTFVEGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMR-AANVKNLIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVEQIL 160
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_CORDI (UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae GN=galE PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 52/170 (30.59%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG 667 +L+TG AG++ S VC+ ++ +++ ++D L + ++ +P A+ FV GDI D+ + +L ++S D ++HFAA++ V S E+ ++N+ T LL+A K +R + ST YGE + + E + PTNPY ATK + + +Y +YG Sbjct: 3 LLVTGGAGYVGS-VCSTVLLEQG-HEVTIVDNLT--TGNRDAVPLGAT----FVEGDIK--DVADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMK-RNNVRNIVFSSTAATYGEPETVPIT---EDAPTHPTNPYGATKLSIDYAITSYAHAYG 158
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14 Identity = 60/174 (34.48%), Postives = 86/174 (49.43%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNLIPSKASSNFKFVRGDIASADL---VNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 IL+TG AGFI SH+ ++LI N Y +++LD L + KN I KA +FV DI DL +NF + ++ ++H AAQ +V NS N N+ GT +LE + + S VYGE + V NH + P +PY +K E + Y R YG+ Sbjct: 2 ILVTGGAGFIGSHIVDKLIEN--NYDVIILDNL--TTGNKNNINPKA----EFVNADIRDKDLDEKINF----KDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENHPIN---PLSPYGLSKYVGEEYIKLYNRLYGI 160
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_YERPE (UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSNLKNL---IPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 +L+TG +G+I SH C +LI YK V+LD L C++ ++ I S + GDI L++ + I ++HFA V S E+ NN++GT VLLEA + Q++ I S+ VYG+ + V + P++PY +K E ++ Sbjct: 3 VLVTGGSGYIGSHTCVQLIE--AGYKPVILDNL--CNSKSSVLARIHSLTGYTPELYAGDIRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMR-AAQVKNLIFSSSATVYGDQPQIPYVESFPTGS--PSSPYGRSKLMVEQIL 160
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: ARAE3_ORYSJ (Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 50/171 (29.24%), Postives = 85/171 (49.71%), Query Frame = 2 Query: 155 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAY 652 ++L+TG AG+I SH RL+++ Y++ ++D L + L+ L P +F+ D+ VN + + D +MHFAA +V S + N T ++LEA G ++ I+ ST YGE ++ +V E ++ LP NPY K AE +++ + Sbjct: 65 HVLVTGGAGYIGSHASLRLLKD--NYRVTIVDNLSRGNMGAVKVLQELFPQPG--RLQFIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHG-VKTLIYSSTCATYGEPEKMPIV---ETTRQLPINPYGKAKKMAEDIILDF 227
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: ARAE2_ARATH (Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 49/174 (28.16%), Postives = 86/174 (49.43%), Query Frame = 2 Query: 155 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDY-----CSNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 661 ++L+TG AG+I SH RL+++ Y++ ++D L L+ L P +F+ D+ A+ VN + + D +MHFAA +V S ++ N T V+LE G ++ I+ ST YGE ++ + E + +P NPY K AE +++ + ++ Sbjct: 71 HVLVTGGAGYIGSHAALRLLKD--SYRVTIVDNLSRGNLGAVKILQQLFPEPGK--LQFIYADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHG-VKTLIYSSTCATYGEPEKMPIT---EETPQVPINPYGKAKKMAEDIILDFSKN 236
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_BACSU (UDP-glucose 4-epimerase OS=Bacillus subtilis GN=galE PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13 Identity = 50/163 (30.67%), Postives = 78/163 (47.85%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCS-NLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 IL+TG AG+I SH C L+ + Y+IVVLD L S N + + F D+ + V+ + I+ ++HFA V S ++ NN+ GT +L EA + G +++ + S+ VYG + + E L TNPY TK E ++ Sbjct: 3 ILVTGGAGYIGSHTCVELLNS--GYEIVVLDNLSNSSAEALNRVKEITGKDLTFYEADLLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYG-VKKIVFSSSATVYGVPETSPIT---EDFPLGATNPYGQTKLMLEQIL 159
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: ARAE1_ARATH (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.667e-13 Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 2 Query: 155 NILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYCSN-----LKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 661 ++L+TG AG+I SH RL++ Y++ ++D L + L+ L P +F+ D+ A VN + + D +MHFAA +V S ++ N T V+LE G ++ I+ ST YGE D ++ E + +P NPY K AE +++ + ++ Sbjct: 72 HVLVTGGAGYIGSHAALRLLKE--SYRVTIVDNLSRGNLAAVRILQELFPEPG--RLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHG-VKTLIYSSTCATYGEPD---IMPITEETPQVPINPYGKAKKMAEDIILDFSKN 237 The following BLAST results are available for this feature:
BLAST of FC876212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876212 ID=FC876212; Name=FC876212; organism=Citrus clementina; type=EST; length=670bpback to top |