FC876212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_HAEIN (UDP-glucose 4-epimerase OS=Haemophilus influenzae GN=galE PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 56/170 (32.94%), Postives = 80/170 (47.06%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-SNLKNL--IPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGE-----TDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 IL+TG AG+I SH L+ E +VVLD L C S+ K+L + KF GDI L+ + I++++HFA V S E+ NN+ GT VL++ K G + F+ S+ VYG+ ED VG TNPY +K E ++ Sbjct: 3 ILVTGGAGYIGSHTVVELLNVGKE--VVVLDNL--CNSSPKSLERVKQITGKEAKFYEGDILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGTLVLIQEMKKAG-VWNFVFSSSATVYGDPKIIPITEDCEVGG-------TTNPYGTSKYMVEQIL 160
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE_DROME (Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=CG12030 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 51/172 (29.65%), Postives = 76/172 (44.19%), Query Frame = 2 Query: 149 PKNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKL--DYCSNLK-----NLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLV 643 P +L+TG AG+I SH ++ Y ++ +D L Y S K + + F R DI + V + ID + HFAA V S ++ NN+ GT+VLLEA + +F++ S+ VYGE V H T+PY TK E ++ Sbjct: 3 PPTVLVTGGAGYIGSHTVLEMLN--AGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFYRVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEA-MADNNVFKFVYSSSATVYGEPKFLPVTEEHPTGNC--TSPYGKTKYFTEEIL 169
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GALE1_PEA (UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 46/162 (28.40%), Postives = 76/162 (46.91%), Query Frame = 2 Query: 152 KNILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLDYC-----SNLKNLIPSKASSNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATK 622 + IL+TG+AGFI +H +L+ N + + ++D D ++ ++ S S N +F GD+ + D + L D ++HFA V S N + NN+ GT L E ++ + S+ VYG+ ++ V E +L NPY TK Sbjct: 6 QKILVTGSAGFIGTHTVVQLLNN--GFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEV-MAKHNCKKMVFSSSATVYGQPEKIPCV---EDFKLQAMNPYGRTK 161
BLAST of FC876212 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11 Identity = 54/174 (31.03%), Postives = 76/174 (43.68%), Query Frame = 2 Query: 158 ILITGAAGFIASHVCNRLIRNYPEYKIVVLDKLD--YCSNLKNLIPSKAS-SNFKFVRGDIASADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGL 670 +L+TGAAGF+ +HV L R ++ LD + Y +LK + S V GDI +L+ L S +MH AAQ V + N + +NI G LLE CK + S+ VYG + + Q P + Y+ATK E + Y YGL Sbjct: 99 VLVTGAAGFVGTHVSAALKRRGDG--VIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQ--PASLYAATKKAGEEIAHTYNHIYGL 268 The following BLAST results are available for this feature:
BLAST of FC876212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876212 ID=FC876212; Name=FC876212; organism=Citrus clementina; type=EST; length=670bpback to top |