FC876215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.015e-53 Identity = 111/209 (53.11%), Postives = 135/209 (64.59%), Query Frame = 3 Query: 102 AGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCG----ECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 A CGS G CP CCSRFGWCG T D+C DGCQS C CG P +G GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AFP FG +G+ RKRE+AAF AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC GK YYGRGPIQL+ N +Y G + G D + NPDL+ Sbjct: 19 AEQCGSQAGGATCPNCLCCSRFGWCGSTSDYCGDGCQSQC--AGCGGGGTPVTPTPTPSGGGG-VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAI--GVDLLRNPDLV 221
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 5.142e-53 Identity = 107/208 (51.44%), Postives = 134/208 (64.42%), Query Frame = 3 Query: 99 SAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 SA CG G C G CCS FGWCG T D+C G CQS C + P G GG++G +IS MF+ +L++RND C + FY+Y+AFI AA++F FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ++ N +Y CG + G D ++NPDL+ Sbjct: 17 SAEQCGKQAGGARCAAGLCCSNFGWCGNTNDYCGPGKCQSQCPSGPSPK-PPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLV 220
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 8.771e-53 Identity = 108/208 (51.92%), Postives = 133/208 (63.94%), Query Frame = 3 Query: 99 SAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 SA CGS G +C G CCS+FGWCG T D+C G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ++ N +Y CG + G D ++NPDL+ Sbjct: 17 SAEQCGSQAGGALCAPGLCCSKFGWCGNTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLV 210
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.333e-52 Identity = 106/208 (50.96%), Postives = 133/208 (63.94%), Query Frame = 3 Query: 99 SAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 SA CGS G +C G CCS+FGWCG T ++C G CQS C G G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ++ N +Y CG + G D ++NPDL+ Sbjct: 21 SAEQCGSQAGGALCASGLCCSKFGWCGNTNEYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQG-SPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLV 214
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.353e-52 Identity = 105/208 (50.48%), Postives = 131/208 (62.98%), Query Frame = 3 Query: 99 SAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDG-CQSNCNQVVCGECDPDDGTAGDG-GELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR--GKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 SA CG G CP G CCS FGWCG T D+C G CQS C P T G G++ IIS MF+ +L++RND C + FYTY+AFI AA++F FG +G+ T RKRE+AAFFAQT HETTGGW AP G YAWGYC+ RE G S YC +PC KYYGRGPIQ+++N +Y CG + G++ ++NPDL+ Sbjct: 22 SAEQCGKQAGGARCPSGMCCSNFGWCGNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAI--GQNLLNNPDLV 226
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.353e-52 Identity = 107/208 (51.44%), Postives = 132/208 (63.46%), Query Frame = 3 Query: 99 SAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 SA CGS G +C G CCS+FGWCG T D+C G CQS C G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGW AP G YAWGYCF RE G + DYC P+ +PC KY+GRGPIQ++ N +Y CG + G D ++NPDL+ Sbjct: 17 SAEQCGSQAGGALCASGLCCSKFGWCGNTNDYCGPGNCQSQC-------------PGGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQG-SPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLV 208
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 202.601 bits (514), Expect = 1.654e-51 Identity = 108/205 (52.68%), Postives = 131/205 (63.90%), Query Frame = 3 Query: 102 AGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 A CGS G CP CCSRFGWCG T +C DGCQS C+ G P T GG + I+SR +F+ +L +RND C A+ FYTYDAF+ AA AF FG +G RKRE+AAF AQT HETTGGW AP G +AWGYCF +E G A+S+YC P+ +PC GK YYGRGPIQL+ N +Y G + G D + NPDL+ Sbjct: 19 AEQCGSQAGGATCPNCLCCSRFGWCGST-PYCGDGCQSQCSGCGGGST-PVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAI--GVDLLRNPDLV 218
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.166e-43 Identity = 87/162 (53.70%), Postives = 100/162 (61.73%), Query Frame = 3 Query: 96 GSAGNCGS---GVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGE----LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYC-FNREVGAASSD 557 GSA CG +CPGG CCS +GWCG T D+C DGCQS C+ G G G GG L II MF+D+L+YRND +CPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HET G WP A G +Y WGYC N G D Sbjct: 19 GSAEQCGQQAGDALCPGGLCCSSYGWCGTTADYCGDGCQSQCDGGGGGGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHMNYNYGLCGDD 180
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.824e-43 Identity = 85/143 (59.44%), Postives = 106/143 (74.13%), Query Frame = 3 Query: 279 KIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 KIISR MF+ +L++RN+ CPA+ FYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF QT HETTGGWP AP G YAWGYCF +E SS+YC P YPC GK YYGRGP+QL+WN +Y CGE L + + NPDL+ Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERN-PSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEAL--RVNLLGNPDLV 143
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.301e-43 Identity = 96/208 (46.15%), Postives = 126/208 (60.58%), Query Frame = 3 Query: 105 GNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDG-----TAGDGGELG--KIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 G G CP CCSR+GWCGLT D+C GCQS C V + DD TA GG G +++ + FE +L +R+D CPAR FY Y AF+ AA AFPAF +G+ RKRE+AAF AQT H T+ GG Y+WGYC+ +EV A+SD+C PN +PC GK Y+ RGP+Q+ +N +Y GE + G D + NP+L+ Sbjct: 36 GRQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCR--VSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAI--GADLLGNPELV 231 The following BLAST results are available for this feature:
BLAST of FC876215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876215 ID=FC876215; Name=FC876215; organism=Citrus clementina; type=EST; length=696bpback to top |