FC876215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30 Identity = 70/141 (49.65%), Postives = 91/141 (64.54%), Query Frame = 3 Query: 273 LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 +G I++ ++F+ +L+ RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT HETTGG +P G YA GYCF RE + YYGRGPIQLT +Y G+ + +D V+NPDL+ Sbjct: 26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-----------YYGRGPIQLTGQSNYDLAGKAI--EQDLVNNPDLV 152
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.117e-30 Identity = 69/141 (48.94%), Postives = 92/141 (65.25%), Query Frame = 3 Query: 273 LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 +G I++ ++F ++L+ RND RCPA FYTYDAFI AA +FP FG SG++T R++EIAAFF QT HETTGG A + GYCF R+ +D D +YYGRGPIQLT +Y + G + +D V+NPDL+ Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNQNNYEKAGNAI--RQDLVNNPDLV 151
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 3 Query: 273 LGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 +G I++ ++F ++L+ RND RCPA FYTYDAFI AA +FP FG +G++T R++EIAAFF QT HETTGG A + GYCF R+ +D D +YYGRGPIQLT +Y + G + G++ V+NPDL+ Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ-----NDQSD-------RYYGRGPIQLTNRNNYEKAGTAI--GQELVNNPDLV 151
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29 Identity = 71/150 (47.33%), Postives = 90/150 (60.00%), Query Frame = 3 Query: 249 GTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRGKYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 G A G +G +I++ +F +L R++ +CPAR FYTYDAFI AA +FPAFG SG + +RE+AAFF QT HETTGG ++ WGYCF E+ A+S YYGRGPIQLT +Y G LG D V NPDL+ Sbjct: 26 GAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSP----------PYYGRGPIQLTGQSNYQAAGNALGL--DLVGNPDLV 160
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29 Identity = 74/202 (36.63%), Postives = 105/202 (51.98%), Query Frame = 3 Query: 111 CGSGV---VCPGGECCSRFGWCGLTIDHCCDG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYC-DPNYPCRG--KYYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPDLL 695 CG+ V C CCS GWCG D+C CQ C+ V G G + +++ +F+ + +R D CP++ FY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C +D+C ++PC KY RGPIQLT N +Y G+ + GED + NPDL+ Sbjct: 72 CGAAVGNPPCGQDRCCSVHGWCGGGNDYCSGSKCQYRCSSSVRGPRVALSGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAI--GEDLIQNPDLV 268
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28 Identity = 69/192 (35.94%), Postives = 98/192 (51.04%), Query Frame = 3 Query: 99 SAGNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP---NYPCRG--KYYGRGPIQLTWNLHYLRCGEGLG 659 +A NCG C CCS+FG+CG T ++C DGCQS C G+ G G + +++ F + + + C + FYT AF+ A K +P F + G++ KREIAAFFA HET +C+ E+ S+ YCDP +PC KYYGRGP+Q++WN +Y G +G Sbjct: 19 AAQNCG----CQPNVCCSKFGYCGTTDEYCGDGCQSG----PCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEIN-KSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIG 187
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.384e-28 Identity = 76/190 (40.00%), Postives = 97/190 (51.05%), Query Frame = 3 Query: 108 NCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGD--GGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR-GK-YYGRGPIQLTWNLHYLRCGEGL 656 NCG C CCS+FG+CG T +C GC+S G C GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA HET +C+ E+ AS DYCD N YPC GK Y+GRGPIQL+WN +Y CG+ L Sbjct: 26 NCG----CAPNLCCSQFGYCGSTDAYCGTGCRS-------GPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSL 186
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.176e-27 Identity = 74/202 (36.63%), Postives = 107/202 (52.97%), Query Frame = 3 Query: 99 SAGNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSNCNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCD---PNYPC-RGK-YYGRGPIQLTWNLHYLRCGEGLGRGEDFVDNPD 689 +A +CG C +CCS++G+CG D+C GCQ+ P D A + + I++ E F L+ +D C A+ FYT DAF+ AA +P+FG +G+ KREIAAFFA HET +C+ E+ S +YCD +PC GK YYGRGP+Q++WN +Y G+ + G D + +PD Sbjct: 24 AAQSCG----CASDQCCSKWGFCGTGSDYCGTGCQAG----------PCDVPATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSI--GFDGLGDPD 195
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26 Identity = 71/193 (36.79%), Postives = 96/193 (49.74%), Query Frame = 3 Query: 99 SAGNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSN-CNQVVCGECDPDDGTAGDGGELGKIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCRG--KYYGRGPIQLTWNLHYLRCGEGLG 659 +A NCG C CCS+FG+CG T +C DGCQS C G G G GG + + F + ++ + C + FYT AF+ A A+P F + G E KREIAAFFA HET +C+ E+ S+ YCD + +PC KYYGRGP+Q++WN +Y G +G Sbjct: 24 AAQNCG----CQPNFCCSKFGYCGTTDAYCGDGCQSGPCRSGGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEIN-KSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIG 198
BLAST of FC876215 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26 Identity = 71/196 (36.22%), Postives = 97/196 (49.49%), Query Frame = 3 Query: 99 SAGNCGSGVVCPGGECCSRFGWCGLTIDHCCDGCQSN-CNQVVCGECDPDDGTAGDGGELG---KIISREMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTCHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN---YPCR--GKYYGRGPIQLTWNLHYLRCGEGLG 659 SA NCG C CCS++G+CG D+C DGC+S C G G G GG G + + E F + ++ + C + FYT +F+ AA ++ F KREIAAFFA HET C+ E+ AS DYCD N +PC+ KYYGRGP+Q++WN +Y G+ +G Sbjct: 28 SAQNCG----CQSNMCCSKWGYCGTGKDYCGDGCRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIG 206 The following BLAST results are available for this feature:
BLAST of FC876215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876215 ID=FC876215; Name=FC876215; organism=Citrus clementina; type=EST; length=696bpback to top |